added icons and improved readme

README.md

@@ -9,12 +9,6 @@ BIDS Manager version 1.4.3
 ## Compiled version
 You can download a compiled version here: https://github.com/Dynamap/BIDS_Manager/archive/main.zip
 
-## How to debug it
-1. Take the following folders from ./app_utils folder and move them to the root folder of the project:
-   1. deface_needs
-   2. SoftwarePipeline
-2. Run the script bids_manager.py to start the app.
-
 ## Features
 * Collect data in differents format:
   * DICOM
@@ -29,11 +23,11 @@ You can download a compiled version here: https://github.com/Dynamap/BIDS_Manage
 * Run analysis with BIDS Manager-Pipeline
 
 ## Main Requirements
-* Python 3.7
+* Python >= 3.7
 * AnyWave, available here: http://meg.univ-amu.fr/wiki/AnyWave
 * dicm2nii.exe (is a Windows compiled version of dicm2nii.m https://github.com/xiangruili/dicm2nii) and requires the version 9.5 (R2018b) of the MATLAB Runtime (http://www.mathworks.com/products/compiler/mcr/index.html)
 
-## Python library required
+## Dependencies
 * pydicom
 * PyQt5
 * bids-validator
@@ -46,6 +40,16 @@ You can download a compiled version here: https://github.com/Dynamap/BIDS_Manage
 * scipy
 * openpyxl
 
+## How to debug it
+1. Take the following folders from ./app_utils folder and move them to the root folder of the project:
+   1. deface_needs
+   2. SoftwarePipeline
+2. Run the script bids_manager.py to start the app.
+
+## Pipelines
+You can to do data analysis with softwares defined in SoftwarePipeline. There are two files .json (as templates) for computing ICA and power spectral density with Anywave, but you can add your own software as soon as it works with command line executions. 
+
+
 ## Authors & Maintainers
 * BIDS Manager developper: Nicolas Roehri <roehri.nicolas@gmail.com>
 * BIDS Uploader developper: Samuel Medina <samuel.medinavillalon@gmail.com>