Fixed bug in full_assembly_report

Edinburgh-Genome-Foundry · Sep 20, 2018 · 1949532 · 1949532
1 parent 56916cc
commit 1949532
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Showing 2 changed files with 5 additions and 2 deletions.
diff --git a/.gitignore b/.gitignore
@@ -35,6 +35,7 @@ nosetests.xml
 .mr.developer.cfg
 .project
 .pydevproject
+.vscode
 
 # Temp files
 

diff --git a/dnacauldron/reports/reports.py b/dnacauldron/reports/reports.py
@@ -289,7 +289,9 @@ def full_assembly_plan_report(assembly_plan, target, part_records=None,
     f.write("construct, parts\n")
     for f_ in root._all_files:
         if f_._name_no_extension == 'report':
-            name, _, _, parts = f_.read('r').split("\n")[1].split(",")
-            f.write("\n" + ",".join([name] + parts.split(" & ")))
+            first_row = f_.read('r').split("\n")[1].split(",")
+            if len(first_row) == 4:
+                name, _, _, parts = first_row
+                f.write("\n" + ",".join([name] + parts.split(" & ")))
 
     return errored_assemblies, root._close()