Fix #65

Edinburgh-Genome-Foundry · Jan 31, 2022 · f107ac3 · f107ac3
1 parent fed4613
commit f107ac3
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/examples/common_scenarios/sequence_without_tf_binding_sites.py b/examples/common_scenarios/sequence_without_tf_binding_sites.py
@@ -16,6 +16,8 @@
 tf_list = tf_column.to_list()
 # According to the description, the binding sites are in uppercase, so we remove lowercase:
 tf_binding_sequences = ["".join(ch for ch in tf if not ch.islower()) for tf in tf_list]
+# Remove single-nucleotide TFs:
+tf_binding_sequences = [tf for tf in tf_binding_sequences if len(tf) > 1]
 
 # DEFINE AND SOLVE THE OPTIMIZATION PROBLEM
 problem = DnaOptimizationProblem(