Add files to reproduce MultiQC/MultiQC#1492

data/modules/qualimap/rnaseqqc/issue_1492/raw_data_qualimapReport/coverage_profile_along_genes_(total).txt

@@ -0,0 +1,101 @@
+#Transcript position	Transcript coverage profile
+0.0	0.0
+1.0	0.0
+2.0	0.0
+3.0	0.0
+4.0	0.0
+5.0	0.0
+6.0	0.0
+7.0	0.0
+8.0	0.0
+9.0	0.0
+10.0	0.0
+11.0	0.0
+12.0	0.0
+13.0	0.0
+14.0	0.0
+15.0	0.0
+16.0	0.0
+17.0	0.0
+18.0	0.0
+19.0	0.0
+20.0	0.0
+21.0	0.0
+22.0	0.0
+23.0	0.0
+24.0	0.0
+25.0	0.0
+26.0	0.0
+27.0	0.0
+28.0	0.0
+29.0	0.0
+30.0	0.0
+31.0	0.0
+32.0	0.0
+33.0	0.0
+34.0	0.0
+35.0	0.0
+36.0	0.0
+37.0	0.0
+38.0	0.0
+39.0	0.0
+40.0	0.0
+41.0	0.0
+42.0	0.0
+43.0	0.0
+44.0	0.0
+45.0	0.0
+46.0	0.0
+47.0	0.0
+48.0	0.0
+49.0	0.0
+50.0	0.0
+51.0	0.0
+52.0	0.0
+53.0	0.0
+54.0	0.0
+55.0	0.0
+56.0	0.0
+57.0	0.0
+58.0	0.0
+59.0	0.0
+60.0	0.0
+61.0	0.0
+62.0	0.0
+63.0	0.0
+64.0	0.0
+65.0	0.0
+66.0	0.0
+67.0	0.0
+68.0	0.0
+69.0	0.0
+70.0	0.0
+71.0	0.0
+72.0	0.0
+73.0	0.0
+74.0	0.0
+75.0	0.0
+76.0	0.0
+77.0	0.0
+78.0	0.0
+79.0	0.0
+80.0	0.0
+81.0	0.0
+82.0	0.0
+83.0	0.0
+84.0	0.0
+85.0	0.0
+86.0	0.0
+87.0	0.0
+88.0	0.0
+89.0	0.0
+90.0	0.0
+91.0	0.0
+92.0	0.0
+93.0	0.0
+94.0	0.0
+95.0	0.0
+96.0	0.0
+97.0	0.0
+98.0	0.0
+99.0	0.0

data/modules/qualimap/rnaseqqc/issue_1492/rnaseq_qc_results.txt

@@ -0,0 +1,45 @@
+RNA-Seq QC report
+-----------------------------------
+
+>>>>>>> Input
+
+    bam file = RAP1_IAA_30M_REP1.markdup.sorted.bam
+    gff file = genome_gfp.gtf
+    counting algorithm = uniquely-mapped-reads
+    protocol = strand-specific-reverse
+    5'-3' bias region size = 100
+    5'-3' bias number of top transcripts = 1000
+
+
+>>>>>>> Reads alignment
+
+    reads aligned (left/right) = 10,836 / 0
+    read pairs aligned  = 5,418
+    total alignments = 11,248
+    secondary alignments = 412
+    non-unique alignments = 598
+    aligned to genes  = 0
+    ambiguous alignments = 0
+    no feature assigned = 0
+    not aligned = 0
+
+
+>>>>>>> Reads genomic origin
+
+    exonic =  0 (NaN%)
+    intronic = 0 (NaN%)
+    intergenic = 0 (NaN%)
+    overlapping exon = 0 (NaN%)
+
+
+>>>>>>> Transcript coverage profile
+
+    5' bias = 0
+    3' bias = 0
+    5'-3' bias = 0
+
+
+>>>>>>> Junction analysis
+
+    reads at junctions = 0
+