WebAnno ⟶ spaCy

A tool that helps you to convert the WebAnno TSV 3.2 files to spaCy's Doc format. The relations are saved into the Doc's rel extension attribute, in the same way as done in the spaCy tutorial video:

{
    (0, 6): { "label1": 1.0, "label2": 0.0, ... },
    (6, 0): { "label1": 0.0, "label2": 0.0, ... },
    ...
}

Usage

$ poetry install
$ webanno2spacy --help
Usage: webanno2spacy [OPTIONS] SPACY_MODEL INPUT_TEXT_FILE INPUT_WEBANNO_FILE

Arguments:
  SPACY_MODEL         [required]
  INPUT_TEXT_FILE     [required]
  INPUT_WEBANNO_FILE  [required]

Options:
  --output-file PATH
  --install-completion [bash|zsh|fish|powershell|pwsh]
                                  Install completion for the specified shell.
  --show-completion [bash|zsh|fish|powershell|pwsh]
                                  Show completion for the specified shell, to
                                  copy it or customize the installation.
  --help                          Show this message and exit.

TODO

• Implement batch conversion of multiple files to DocBin

See also

• WebAnno TSV 3.2 File format
• spaCy custom relation extraction pipeline (YouTube)
• spaCy custom relation extraction pipeline (code)