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⚡️ Setting data- and operation-dependent memory-estimates #1509

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shnizzedy opened this issue May 13, 2021 · 0 comments
Open

⚡️ Setting data- and operation-dependent memory-estimates #1509

shnizzedy opened this issue May 13, 2021 · 0 comments

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@shnizzedy
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shnizzedy commented May 13, 2021

Related problem

Some nodes can use more memory than the default estimate depending on the size of the input data and the operations performed on those data.

Nodes known or suspected to cause memory overruns:

  • {ventricles_key}_ants
  • apply_ants_warp_{output_name}_{inverse_string}_{registration_template}_{num_strat}
  • apply_warp_{wf_name}
  • calc_ants_warp
  • cal_DVARS
  • collect_transforms{symm}
  • copy_xform
  • {regressor_type}_DetrendPC
  • 3dROIstats
  • erode_skullstrip_mask
  • 19_fill_7
  • 07_fill_gm
  • {anatomical_at_resolution_key}_flirt
  • {functional_at_resolution_key}_flirt
  • {node_mask_key}_flirt
  • frequency_filter
  • func_deoblique_{pipe_num}
  • func_despiked_{pipe_num}
  • func_drop_trs
  • func_get_idx (🐛 RuntimeError: Insufficient resources available for job #1511)
  • func_get_mean_RPI_{pipe_num}
  • func_mask_normalize_{pipe_num}
  • func_normalize_{pipe_num}
  • func_reoprient_{pipe_num}
  • map_brainmask
  • ndmg_graphs_{pipe_num}
  • {regressor_type}_norm
  • nuisance_regression
  • overlap_{wf_name}_map_with_prior
  • resample_spatial_map_to_native_space_{pipe_num}
  • segment_{pipe_num}
  • sel_wm
  • slice_timing
  • spatial_regression
  • {regressor_type}_union_masks
  • warp_ts_to_sym_template_{pipe_num}
  • write_composite_invlinear{symm}_xfm
  • write_composite_inv_{symm}xfm
  • write_composite_linear{symm}_xfm
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