🐛 desc-preproc_T2w not in resource pool

[shnizzedy]

Describe the bug

LookupError: When trying to connect node block 'coregistration' to workflow 'cpac_sub-NDARAA306NT2_ses-1' after node block 'coregistration_prep_fmriprep': 

[!] C-PAC says: The listed resource is not in the resource pool:
desc-preproc_T2w

Developer Note: This may be due to a mismatch between the node block's docstring 'input' field and a strat_pool.get_data() call within the block function.

To reproduce

Run default pipeline with bids_dir s3://fcp-indi/data/Projects/HBN/MRI/Site-RU

Expected behavior

cpac_pipeline adds a node block to generate this resource

Acceptance criteria

• cpac_pipeline adds a node block to generate desc-preproc_T2w

Screenshots

No response

C-PAC version

v1.8.2-dev

Container platform

Docker

Docker and/or Singularity version(s)

Docker 20.10.7-0ubuntu5.1

Additional context

Discovered while working on #1610 (comment)

Seems to be the relevant section of the pipeline builder:

C-PAC/CPAC/pipeline/cpac_pipeline.py

Lines 877 to 904 in 0ead4ab

	if not rpool.check_rpool('desc-preproc_T2w'):
	# brain masking for ACPC alignment
	if cfg.anatomical_preproc['acpc_alignment']['acpc_target'] == 'brain':
	if rpool.check_rpool('space-T2w_desc-brain_mask'):
	acpc_blocks_T2 = [
	brain_extraction_temp_T2,
	acpc_align_brain_with_mask_T2
	# outputs space-T2w_desc-brain_mask for later - keep the mask (the user provided)
	]
	else:
	acpc_blocks_T2 = [
	brain_mask_acpc_T2,
	# we don't want these masks to be used later, only used in brain_extraction_temp_T2
	brain_extraction_temp_T2,
	acpc_align_brain_T2
	]
	elif cfg.anatomical_preproc['acpc_alignment'][
	'acpc_target'] == 'whole-head':
	if rpool.check_rpool('space-T2w_desc-brain_mask'):
	acpc_blocks_T2 = [
	acpc_align_head_with_mask_T2
	# outputs space-T2w_desc-brain_mask for later - keep the mask (the user provided)
	]
	else:
	acpc_blocks_T2 = [
	acpc_align_head_T2 # does not output nor generate a mask
	]

[shnizzedy]

I think this change should happen, but it doesn't seem to resolve this issue.