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Missing headers #121

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galeone opened this issue Jul 13, 2018 · 3 comments
Closed

Missing headers #121

galeone opened this issue Jul 13, 2018 · 3 comments

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@galeone
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galeone commented Jul 13, 2018

Hi, I've installed system-wide tensorflow_cc:

cmake -DTENSORFLOW_STATIC=OFF -DTENSORFLOW_SHARED=ON ..
make
sudo make install

I've created a cpp file that requires to include:

#include <tensorflow/cc/ops/standard_ops.h>
#include <tensorflow/cc/saved_model/loader.h>
#include <tensorflow/core/public/session.h>
#include <tensorflow/core/public/session_options.h>

but during the resulution of the first include standard_ops.h the following error arise:

In file included from /home/pgaleone/TFModel.hpp:14,
                 from /home/pgaleone/TFModel.cc:6:
/usr/local/include/tensorflow/tensorflow/cc/ops/standard_ops.h:19:10: fatal error: tensorflow/cc/ops/array_ops.h: No such file or directory
 #include "tensorflow/cc/ops/array_ops.h"
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

So I tried to comment that include, just to debug and another error arises:

In file included from /usr/local/include/tensorflow/tensorflow/cc/saved_model/loader.h:24,
                 from /home/pgaleone//TFModel.hpp:15,
                 from /home/pgaleone/TFModel.cc:6:
/usr/local/include/tensorflow/tensorflow/core/lib/core/status.h:23:10: fatal error: tensorflow/core/lib/core/error_codes.pb.h: No such file or directory
 #include "tensorflow/core/lib/core/error_codes.pb.h"
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Hence, there are some headers that have been generated but not correctly installed under /usr/local

@galeone
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galeone commented Jul 13, 2018

this is a workaround:

sudo cp -r  ./tensorflow/bazel-genfiles/genfiles/tensorflow/* /usr/local/include/tensorflow/tensorflow/

Of course we must do this from cmake

@FloopCZ
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FloopCZ commented Jul 14, 2018

Can you please provide the output of VERBOSE=1 make of your program? (not tensorflow_cc, but your program)

If it is missing an include directory, we should add it here:
https://github.com/FloopCZ/tensorflow_cc/blob/master/tensorflow_cc/CMakeLists.txt#L68

@galeone
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galeone commented Jul 16, 2018

Yes I can, but please note that I already applied the workaround I suggested (otherwise I wasn't' able to continue my work):

/usr/bin/cmake -H/home/pgaleone/sources/cv/aac_calib_tool/libs/gewrap -B/home/pgaleone/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /home/pgaleone/build/CMakeFiles /home/pgaleone/build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/data/pgaleone/build'
make -f CMakeFiles/do_always.dir/build.make CMakeFiles/do_always.dir/depend
make[2]: Entering directory '/data/pgaleone/build'
cd /home/pgaleone/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pgaleone/sources/cv/aac_calib_tool/libs/gewrap /home/pgaleone/sources/cv/aac_calib_tool/libs/gewrap /home/pgaleone/build /home/pgaleone/build /home/pgaleone/build/CMakeFiles/do_always.dir/DependInfo.cmake --color=
Dependee "/home/pgaleone/build/CMakeFiles/do_always.dir/DependInfo.cmake" is newer than depender "/home/pgaleone/build/CMakeFiles/do_always.dir/depend.internal".
Dependee "/home/pgaleone/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/pgaleone/build/CMakeFiles/do_always.dir/depend.internal".
Scanning dependencies of target do_always
make[2]: Leaving directory '/data/pgaleone/build'
make -f CMakeFiles/do_always.dir/build.make CMakeFiles/do_always.dir/build
make[2]: Entering directory '/data/pgaleone/build'
/usr/bin/cmake -E copy_if_different /home/pgaleone/build/compile_commands.json /home/pgaleone/compile_commands.json
make[2]: Leaving directory '/data/pgaleone/build'
[  0%] Built target do_always
make -f src/CMakeFiles/gewrap.dir/build.make src/CMakeFiles/gewrap.dir/depend
make[2]: Entering directory '/data/pgaleone/build'
cd /home/pgaleone/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /home/pgaleone/sources/cv/aac_calib_tool/libs/gewrap /home/pgaleone/src /home/pgaleone/build /home/pgaleone/build/src /home/pgaleone/build/src/CMakeFiles/gewrap.dir/DependInfo.cmake --color=
Dependee "/home/pgaleone/build/src/CMakeFiles/gewrap.dir/DependInfo.cmake" is newer than depender "/home/pgaleone/build/src/CMakeFiles/gewrap.dir/depend.internal".
Dependee "/home/pgaleone/build/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/home/pgaleone/build/src/CMakeFiles/gewrap.dir/depend.internal".
Scanning dependencies of target gewrap
make[2]: Leaving directory '/data/pgaleone/build'
make -f src/CMakeFiles/gewrap.dir/build.make src/CMakeFiles/gewrap.dir/build
make[2]: Entering directory '/data/pgaleone/build'
[ 10%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/BaslerCamSystem.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/BaslerCamSystem.cc.o -c /home/pgaleone/src/gewrap/BaslerCamSystem.cc
[ 20%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/BaumerCamSystem.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/BaumerCamSystem.cc.o -c /home/pgaleone/src/gewrap/BaumerCamSystem.cc
[ 30%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/CamSystem.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/CamSystem.cc.o -c /home/pgaleone/src/gewrap/CamSystem.cc
[ 40%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/CameraCalibration.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/CameraCalibration.cc.o -c /home/pgaleone/src/gewrap/CameraCalibration.cc
[ 50%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/CameraCalibrationSettings.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/CameraCalibrationSettings.cc.o -c /home/pgaleone/src/gewrap/CameraCalibrationSettings.cc
[ 60%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/Detector.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/Detector.cc.o -c /home/pgaleone/src/gewrap/Detector.cc
[ 70%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/Ruler.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/Ruler.cc.o -c /home/pgaleone/src/gewrap/Ruler.cc
[ 80%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/TFModel.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/TFModel.cc.o -c /home/pgaleone/src/gewrap/TFModel.cc
[ 90%] Building CXX object src/CMakeFiles/gewrap.dir/gewrap/math/utils.cc.o
cd /home/pgaleone/build/src && /usr/bin/c++  -DOPENCV_TRAITS_ENABLE_DEPRECATED -Dgewrap_EXPORTS -I/home/pgaleone/include -I/home/pgaleone/libs/nlohmann -isystem /usr/include/opencv -I/home/pgaleone/libs/baumer/inc -isystem /usr/local/include/tensorflow -isystem /usr/local/include/tensorflow/bazel-genfiles -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/eigen -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/gemmlowp -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/downloads/nsync/public -isystem /usr/local/include/tensorflow/tensorflow/contrib/makefile/gen/protobuf-host/include  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3 -fPIC   -std=c++11 -std=gnu++1z -o CMakeFiles/gewrap.dir/gewrap/math/utils.cc.o -c /home/pgaleone/src/gewrap/math/utils.cc
[100%] Linking CXX shared library libgewrap.so
cd /home/pgaleone/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gewrap.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC  -Wall -Wextra -pedantic -D_GNULINUX -D_WITH_BAUMER_GIGE -O3  -shared -Wl,-soname,libgewrap.so -o libgewrap.so CMakeFiles/gewrap.dir/gewrap/BaslerCamSystem.cc.o CMakeFiles/gewrap.dir/gewrap/BaumerCamSystem.cc.o CMakeFiles/gewrap.dir/gewrap/CamSystem.cc.o CMakeFiles/gewrap.dir/gewrap/CameraCalibration.cc.o CMakeFiles/gewrap.dir/gewrap/CameraCalibrationSettings.cc.o CMakeFiles/gewrap.dir/gewrap/Detector.cc.o CMakeFiles/gewrap.dir/gewrap/Ruler.cc.o CMakeFiles/gewrap.dir/gewrap/TFModel.cc.o CMakeFiles/gewrap.dir/gewrap/math/utils.cc.o  -L/opt/cuda/lib64 -Wl,-rpath,/opt/cuda/lib64:/usr/local/bin:/usr/local/lib/tensorflow_cc -lpthread /usr/lib/libopencv_cudabgsegm.so.3.4.2 /usr/lib/libopencv_cudaobjdetect.so.3.4.2 /usr/lib/libopencv_cudastereo.so.3.4.2 /usr/lib/libopencv_stitching.so.3.4.2 /usr/lib/libopencv_superres.so.3.4.2 /usr/lib/libopencv_videostab.so.3.4.2 /usr/lib/libopencv_aruco.so.3.4.2 /usr/lib/libopencv_bgsegm.so.3.4.2 /usr/lib/libopencv_bioinspired.so.3.4.2 /usr/lib/libopencv_ccalib.so.3.4.2 /usr/lib/libopencv_cvv.so.3.4.2 /usr/lib/libopencv_dnn_objdetect.so.3.4.2 /usr/lib/libopencv_dpm.so.3.4.2 /usr/lib/libopencv_face.so.3.4.2 /usr/lib/libopencv_freetype.so.3.4.2 /usr/lib/libopencv_fuzzy.so.3.4.2 /usr/lib/libopencv_hdf.so.3.4.2 /usr/lib/libopencv_hfs.so.3.4.2 /usr/lib/libopencv_img_hash.so.3.4.2 /usr/lib/libopencv_line_descriptor.so.3.4.2 /usr/lib/libopencv_optflow.so.3.4.2 /usr/lib/libopencv_reg.so.3.4.2 /usr/lib/libopencv_rgbd.so.3.4.2 /usr/lib/libopencv_saliency.so.3.4.2 /usr/lib/libopencv_stereo.so.3.4.2 /usr/lib/libopencv_structured_light.so.3.4.2 /usr/lib/libopencv_surface_matching.so.3.4.2 /usr/lib/libopencv_tracking.so.3.4.2 /usr/lib/libopencv_xfeatures2d.so.3.4.2 /usr/lib/libopencv_ximgproc.so.3.4.2 /usr/lib/libopencv_xobjdetect.so.3.4.2 /usr/lib/libopencv_xphoto.so.3.4.2 -lstdc++fs -ltinyxml2 /opt/cuda/lib64/libcudart_static.a -lpthread -ldl -lrt /usr/local/bin/libbgapi2_ext.so /usr/local/bin/libbgapi2_genicam.so /usr/local/bin/libbgapi2_genicam.so /usr/local/bin/libbgapi2_img.so /usr/lib/libopencv_cudafeatures2d.so.3.4.2 /usr/lib/libopencv_shape.so.3.4.2 /usr/lib/libopencv_cudacodec.so.3.4.2 /usr/lib/libopencv_cudaoptflow.so.3.4.2 /usr/lib/libopencv_cudalegacy.so.3.4.2 /usr/lib/libopencv_cudawarping.so.3.4.2 /usr/lib/libopencv_photo.so.3.4.2 /usr/lib/libopencv_cudaimgproc.so.3.4.2 /usr/lib/libopencv_cudafilters.so.3.4.2 /usr/lib/libopencv_cudaarithm.so.3.4.2 /usr/lib/libopencv_calib3d.so.3.4.2 /usr/lib/libopencv_phase_unwrapping.so.3.4.2 /usr/lib/libopencv_video.so.3.4.2 /usr/lib/libopencv_datasets.so.3.4.2 /usr/lib/libopencv_plot.so.3.4.2 /usr/lib/libopencv_text.so.3.4.2 /usr/lib/libopencv_dnn.so.3.4.2 /usr/lib/libopencv_features2d.so.3.4.2 /usr/lib/libopencv_flann.so.3.4.2 /usr/lib/libopencv_highgui.so.3.4.2 /usr/lib/libopencv_ml.so.3.4.2 /usr/lib/libopencv_videoio.so.3.4.2 /usr/lib/libopencv_imgcodecs.so.3.4.2 /usr/lib/libopencv_objdetect.so.3.4.2 /usr/lib/libopencv_imgproc.so.3.4.2 /usr/lib/libopencv_core.so.3.4.2 /usr/lib/libopencv_cudev.so.3.4.2 /usr/local/lib/tensorflow_cc/libtensorflow_cc.so -lpthread -ldl /usr/local/lib/tensorflow_cc/libprotobuf.a 
make[2]: Leaving directory '/data/pgaleone/build'
[100%] Built target gewrap
make[1]: Leaving directory '/data/pgaleone/build'
/usr/bin/cmake -E cmake_progress_start /home/pgaleone/build/CMakeFiles 0

Moreover, I had to manually apply the PR #120 in order to correctly install libtensorflow_cc (hence IMO it should be merged).

galeone added a commit to galeone/tensorflow_cc that referenced this issue Jul 19, 2018
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