DOI corrected in paper.bib #58
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| name: Ubuntu | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| workflow_dispatch: | |
| jobs: | |
| Ubuntu-coverage: | |
| runs-on: ubuntu-20.04 | |
| env: | |
| FC: gfortran | |
| PFUNIT_DIR: /home/runner/work/GORILLA/GORILLA/pFUnit/build/installed/PFUNIT-4.7/ | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install wget unzip gfortran liblapack-dev libnetcdff-dev | |
| sudo apt install lcov | |
| - name: Install pFUnit | |
| run: | | |
| git clone https://github.com/Goddard-Fortran-Ecosystem/pFUnit | |
| cd pFUnit | |
| mkdir -p build | |
| cd build | |
| cmake .. | |
| make -j$(nproc) | |
| make tests | |
| make install | |
| - name: Additional Files | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| wget -O 954.zip "https://dl.acm.org/action/downloadSupplement?doi=10.1145%2F2699468&file=954.zip&download=true" | |
| unzip 954.zip | |
| cp 954/F90/Src/Polynomial234RootSolvers.f90 SRC/contrib/ | |
| - name: Build | |
| run: | | |
| ./build_coverage.sh | |
| - name: Archive code coverage results | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: code-coverage-report | |
| path: BUILD/COVERAGE/ | |
| Ubuntu: | |
| runs-on: ubuntu-20.04 | |
| env: | |
| FC: gfortran | |
| PFUNIT_DIR: /home/runner/work/GORILLA/GORILLA/pFUnit/build/installed/PFUNIT-4.7 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install wget unzip gfortran liblapack-dev libnetcdff-dev | |
| - name: Additional Files | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| wget -O 954.zip "https://dl.acm.org/action/downloadSupplement?doi=10.1145%2F2699468&file=954.zip&download=true" | |
| unzip 954.zip | |
| cp 954/F90/Src/Polynomial234RootSolvers.f90 SRC/contrib/ | |
| - name: Build | |
| run: | | |
| ./build.sh | |
| - name: Run examples | |
| run: | | |
| cd EXAMPLES/example_1 | |
| ./test_gorilla_main_cmake.x | |
| cd ../../EXAMPLES/example_2 | |
| ./test_gorilla_main_cmake.x | |
| cd ../../EXAMPLES/example_3 | |
| ./test_gorilla_main_cmake.x | |
| cd ../../EXAMPLES/example_4 | |
| ./test_gorilla_main_cmake.x | |
| cd ../../EXAMPLES/example_5 | |
| ./test_gorilla_main_cmake.x | |
| cd ../../EXAMPLES/example_6 | |
| ./test_gorilla_main_cmake.x | |
| cd ../../EXAMPLES/example_7 | |
| ./test_gorilla_main_cmake.x | |
| - name: Set up MATLAB | |
| uses: matlab-actions/setup-matlab@v1 | |
| - name: Run MATLAB scripts | |
| uses: matlab-actions/run-command@v1 | |
| with: | |
| command: | | |
| cd MATLAB | |
| example_1 | |
| example_2 | |
| example_3 | |
| example_4 | |
| example_5 | |
| example_6 | |
| example_7 | |
| example_8 | |
| - name: Run MATLAB livescript | |
| uses: matlab-actions/run-command@v1 | |
| with: | |
| command: | | |
| cd MATLAB | |
| plotting_tutorial | |
| - name: Archive MATLAB results | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: MATLAB-RESULTS | |
| path: MATLAB/data_plots | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: 3.9 | |
| - name: Install PYTHON dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install f90nml numpy matplotlib jupyter jupyterlab | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: Run PYTHON scripts | |
| run: | | |
| cd PYTHON | |
| python3.9 example_1.py | |
| python3.9 example_2.py | |
| python3.9 example_3.py | |
| python3.9 example_4.py | |
| python3.9 example_5.py | |
| python3.9 example_6.py | |
| python3.9 example_7.py | |
| - name: Run PYTHON plottingscripts | |
| run: | | |
| cd PYTHON | |
| python3.9 plot_example_1.py | |
| python3.9 plot_example_2.py | |
| python3.9 plot_example_3.py | |
| python3.9 plot_example_4.py | |
| python3.9 plot_example_5.py | |
| python3.9 plot_example_6.py | |
| python3.9 plot_example_7.py | |
| - name: Run JUPYTER notebook | |
| run: | | |
| cd PYTHON | |
| jupyter nbconvert --to script plotting_tutorial.ipynb | |
| python3.9 plotting_tutorial.py | |
| - name: Archive PYTHON results | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: PYTHON-RESULTS | |
| path: PYTHON/data_plots | |