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ver 1.1.4 #28

Merged
merged 29 commits into from Sep 24, 2019
Merged

ver 1.1.4 #28

merged 29 commits into from Sep 24, 2019

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marcmaxson
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  • adds download CLI function for public GEO/ArrayExpress data
  • add batch_size parameter to run_pipeline
  • handles blank sample_name and ensures names are unique.

markt and others added 29 commits August 14, 2019 10:09
* download command, as well as some batch_size adjustments

* fixed string issue

* renaming update and removed redundant tests

* bs4 required for Array ingester

* tests

* workaround to return objects with batch size changes

* workaround to return objects with batch size changes

* bug

* tests pass for batch_size
* download command, as well as some batch_size adjustments

* fixed string issue

* renaming update and removed redundant tests

* bs4 required for Array ingester

* tests

* workaround to return objects with batch size changes

* workaround to return objects with batch size changes

* bug

* tests pass for batch_size

* progress bars
@marcmaxson marcmaxson merged commit aa95129 into master Sep 24, 2019
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2 participants