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  • University of Oslo
  • Oslo

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Pinned

  1. q2-metadata q2-metadata Public

    Forked from qiime2/q2-metadata

    Python

  2. microbiome_analyzer microbiome_analyzer Public

    Command line tool that writes commands to run one by one to perform analyses (mainly using qiime2) on a HPC running Slurm, Torque or none of these.

    Python 1

  3. Xclusion_criteria Xclusion_criteria Public

    Generate interactive, user-defined visualisations to help defining inclusion/exclusion criteria on a metadata table

    Python

  4. Xrbfetch Xrbfetch Public

    Fetch microbiome tables using RedBiom based on a metadata file and filter (i) blooms, (ii) read-sum based and (iii) duplicate hosts and preps (only for Qiita/AGP)

    Python