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A few minor fixes and enhancements Changes: https://github.com/lh3/seqtk/tags
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Jason W. Bacon
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Jason W. Bacon
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Dec 18, 2021
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,3 +1,3 @@ | ||
| TIMESTAMP = 1522780777 | ||
| SHA256 (lh3-seqtk-1.2-8-gd210c57_GH0.tar.gz) = 557317aab7f8cc306a98cd1148449f1e2edd7cd7c78ad5254ba955dfee518fa0 | ||
| SIZE (lh3-seqtk-1.2-8-gd210c57_GH0.tar.gz) = 21166 | ||
| TIMESTAMP = 1639855187 | ||
| SHA256 (lh3-seqtk-v1.3_GH0.tar.gz) = 5a1687d65690f2f7fa3f998d47c3c5037e792f17ce119dab52fff3cfdca1e563 | ||
| SIZE (lh3-seqtk-v1.3_GH0.tar.gz) = 21196 |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,20 +1,35 @@ | ||
| --- Makefile.orig 2017-11-07 19:42:14 UTC | ||
| --- Makefile.orig 2018-06-18 00:15:09 UTC | ||
| +++ Makefile | ||
| @@ -1,10 +1,11 @@ | ||
| @@ -1,14 +1,23 @@ | ||
| -CC=gcc | ||
| -CFLAGS=-g -Wall -O2 -Wno-unused-function | ||
| +CC ?= gcc | ||
| +CFLAGS ?= -g -Wall -O2 -Wno-unused-function | ||
| +LDFLAGS += -lz -lm | ||
| -BINDIR=/usr/local/bin | ||
|
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||
| -all:seqtk | ||
| +all: seqtk | ||
| +# Respect user's build environment by using ?= to set defaults for variables | ||
| +# not set in the env or make arguments. Use += to add essential args. | ||
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||
| -seqtk:seqtk.c khash.h kseq.h | ||
| - $(CC) $(CFLAGS) seqtk.c -o $@ -lz -lm | ||
| +CC ?= gcc | ||
| +CFLAGS ?= -g -Wall -O2 -Wno-unused-function | ||
| +LDFLAGS += -lz -lm | ||
| +PREFIX ?= /usr/local | ||
| +MKDIR ?= mkdir | ||
| +INSTALL ?= install | ||
| +# DESTDIR is empty by default to install straight to PREFIX | ||
|
|
||
| -install:all | ||
| - install seqtk $(BINDIR) | ||
| +all: seqtk | ||
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||
| +seqtk: seqtk.c khash.h kseq.h | ||
| + $(CC) $(CFLAGS) seqtk.c -o $@ $(LDFLAGS) | ||
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||
| + | ||
| +install: all | ||
| + $(MKDIR) -p $(DESTDIR)$(PREFIX)/bin | ||
| + $(INSTALL) -c -m 0755 seqtk $(DESTDIR)$(PREFIX)/bin | ||
| + | ||
| clean: | ||
| - rm -fr gmon.out *.o ext/*.o a.out seqtk trimadap *~ *.a *.dSYM session* | ||
| + rm -fr gmon.out *.o ext/*.o a.out seqtk trimadap *~ *.a *.dSYM session* |