science/axom: Update 0.5.0 -> 0.6.0

Reported by:	portscout

science/axom/Makefile

@@ -1,7 +1,6 @@
 PORTNAME=	axom
 DISTVERSIONPREFIX=	v
-DISTVERSION=	0.5.0
-PORTREVISION=	1
+DISTVERSION=	0.6.0
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
@@ -20,8 +19,8 @@ USES=		cmake compiler:c++11-lang
 
 USE_GITHUB=	yes
 GH_ACCOUNT=	LLNL
-GH_TUPLE=	LLNL:axom_data:517e53e:axom_data/../data \
-		LLNL:blt:7ec2cb8:blt/cmake/blt \
+GH_TUPLE=	LLNL:axom_data:b3d8e6f:axom_data/../data \
+		LLNL:blt:ddd5a0c:blt/cmake/blt \
 		LLNL:uberenv:a121a45:uberenv/scripts/uberenv
 
 CMAKE_OFF=	AXOM_ENABLE_DOCS AXOM_ENABLE_EXAMPLES AXOM_ENABLE_TESTS FREEBSD_ENABLE_EXAMPLES

science/axom/distinfo

@@ -1,9 +1,9 @@
-TIMESTAMP = 1621178119
-SHA256 (LLNL-axom-v0.5.0_GH0.tar.gz) = 4a506556355a5024e8932669fac913fb0a8aa855d03cf8345873789e383af2eb
-SIZE (LLNL-axom-v0.5.0_GH0.tar.gz) = 12024819
-SHA256 (LLNL-axom_data-517e53e_GH0.tar.gz) = 10c54db1feb46efbe0b8ce72d2f36aedfc00e1dd9302d532e6a0e2f8ecab1cd8
-SIZE (LLNL-axom_data-517e53e_GH0.tar.gz) = 36265745
-SHA256 (LLNL-blt-7ec2cb8_GH0.tar.gz) = b2e51460154a9b04cc6e396c6e7fbcdc147f0bf802c1368c7e3514e63f8a10a8
-SIZE (LLNL-blt-7ec2cb8_GH0.tar.gz) = 1218321
+TIMESTAMP = 1637270412
+SHA256 (LLNL-axom-v0.6.0_GH0.tar.gz) = 3c567c5e33c8ea554576a80902aefb5c47bf9d8a9f94642112a9318ef4d160a5
+SIZE (LLNL-axom-v0.6.0_GH0.tar.gz) = 12210654
+SHA256 (LLNL-axom_data-b3d8e6f_GH0.tar.gz) = 3b6f9c5d12c2ea4f5ecc3e946264eddb8b8afb69bd05af6b93202fe60d9eacca
+SIZE (LLNL-axom_data-b3d8e6f_GH0.tar.gz) = 46238341
+SHA256 (LLNL-blt-ddd5a0c_GH0.tar.gz) = 5c235a9b160f1cc3f6ce4d7c80bf72772ac10839909f4f96075d08b3edd8f540
+SIZE (LLNL-blt-ddd5a0c_GH0.tar.gz) = 1220052
 SHA256 (LLNL-uberenv-a121a45_GH0.tar.gz) = 325f9bebeb7283db51918bb6a9a0894fb8ceb52b561e83b72b2987ddc08c33ca
 SIZE (LLNL-uberenv-a121a45_GH0.tar.gz) = 19698

science/axom/files/patch-CMakeLists.txt

@@ -1,12 +1,12 @@
---- CMakeLists.txt.orig	2020-10-08 19:49:25 UTC
+--- CMakeLists.txt.orig	2021-11-03 19:31:10 UTC
 +++ CMakeLists.txt
-@@ -88,7 +88,9 @@ include(cmake/AxomVersion.cmake)
- add_subdirectory(axom)
+@@ -122,7 +122,9 @@ if(AXOM_ENABLE_TOOLS)
+ endif()
 
- add_subdirectory(tools)
+ # Using Axom install examples
 +if (FREEBSD_ENABLE_EXAMPLES)
  add_subdirectory(examples)
 +endif()
 
- if (AXOM_ENABLE_DOCS)
-   if (SPHINX_FOUND)
+ if(AXOM_ENABLE_DOCS)
+     if(SPHINX_FOUND)

science/axom/pkg-plist

@@ -1,9 +1,14 @@
 bin/mesh_tester
-include/CLI11/CLI11.hpp
+include/axom/CLI11.hpp
 include/axom/config.hpp
 include/axom/core.hpp
 include/axom/core/Array.hpp
+include/axom/core/ArrayBase.hpp
+include/axom/core/ArrayIteratorBase.hpp
+include/axom/core/ArrayView.hpp
+include/axom/core/IteratorBase.hpp
 include/axom/core/Macros.hpp
+include/axom/core/Map.hpp
 include/axom/core/Path.hpp
 include/axom/core/StackArray.hpp
 include/axom/core/Types.hpp
@@ -29,11 +34,28 @@ include/axom/core/utilities/About.hpp
 include/axom/core/utilities/AnnotationMacros.hpp
 include/axom/core/utilities/FileUtilities.hpp
 include/axom/core/utilities/StringUtilities.hpp
+include/axom/core/utilities/System.hpp
 include/axom/core/utilities/Timer.hpp
 include/axom/core/utilities/Utilities.hpp
 include/axom/core/utilities/nvtx/Macros.hpp
 include/axom/core/utilities/nvtx/Range.hpp
 include/axom/core/utilities/nvtx/interface.hpp
+include/axom/fmt.hpp
+include/axom/fmt/LICENSE.rst
+include/axom/fmt/README
+include/axom/fmt/args.h
+include/axom/fmt/chrono.h
+include/axom/fmt/color.h
+include/axom/fmt/compile.h
+include/axom/fmt/compile.h.patch
+include/axom/fmt/core.h
+include/axom/fmt/format-inl.h
+include/axom/fmt/format.h
+include/axom/fmt/locale.h
+include/axom/fmt/os.h
+include/axom/fmt/ostream.h
+include/axom/fmt/printf.h
+include/axom/fmt/ranges.h
 include/axom/inlet.hpp
 include/axom/inlet/ConduitReader.hpp
 include/axom/inlet/Container.hpp
@@ -52,8 +74,19 @@ include/axom/inlet/VerifiableScalar.hpp
 include/axom/inlet/Writer.hpp
 include/axom/inlet/YAMLReader.hpp
 include/axom/inlet/inlet_utils.hpp
+include/axom/klee.hpp
+include/axom/klee/Dimensions.hpp
+include/axom/klee/Geometry.hpp
+include/axom/klee/GeometryOperators.hpp
+include/axom/klee/IO.hpp
+include/axom/klee/KleeError.hpp
+include/axom/klee/Shape.hpp
+include/axom/klee/ShapeSet.hpp
+include/axom/klee/Units.hpp
 include/axom/mint.hpp
 include/axom/mint/config.hpp
+include/axom/mint/deprecated/MCArray.hpp
+include/axom/mint/deprecated/SidreMCArray.hpp
 include/axom/mint/execution/interface.hpp
 include/axom/mint/execution/internal/for_all_cells.hpp
 include/axom/mint/execution/internal/for_all_faces.hpp
@@ -101,11 +134,13 @@ include/axom/primal.hpp
 include/axom/primal/geometry/BezierCurve.hpp
 include/axom/primal/geometry/BoundingBox.hpp
 include/axom/primal/geometry/NumericArray.hpp
+include/axom/primal/geometry/Octahedron.hpp
 include/axom/primal/geometry/OrientationResult.hpp
 include/axom/primal/geometry/OrientedBoundingBox.hpp
 include/axom/primal/geometry/Plane.hpp
 include/axom/primal/geometry/Point.hpp
 include/axom/primal/geometry/Polygon.hpp
+include/axom/primal/geometry/Polyhedron.hpp
 include/axom/primal/geometry/Ray.hpp
 include/axom/primal/geometry/Segment.hpp
 include/axom/primal/geometry/Sphere.hpp
@@ -123,21 +158,34 @@ include/axom/primal/operators/detail/intersect_ray_impl.hpp
 include/axom/primal/operators/in_sphere.hpp
 include/axom/primal/operators/intersect.hpp
 include/axom/primal/operators/orientation.hpp
+include/axom/primal/operators/split.hpp
 include/axom/primal/operators/squared_distance.hpp
+include/axom/primal/utils/ZipBoundingBox.hpp
+include/axom/primal/utils/ZipIndexable.hpp
+include/axom/primal/utils/ZipPoint.hpp
+include/axom/primal/utils/ZipRay.hpp
+include/axom/primal/utils/ZipVector.hpp
 include/axom/quest.hpp
 include/axom/quest/AllNearestNeighbors.hpp
+include/axom/quest/Discretize.hpp
 include/axom/quest/InOutOctree.hpp
 include/axom/quest/MeshTester.hpp
 include/axom/quest/PointInCell.hpp
 include/axom/quest/SignedDistance.hpp
 include/axom/quest/detail/AllNearestNeighbors_detail.hpp
+include/axom/quest/detail/Discretize_detail.hpp
 include/axom/quest/detail/PointFinder.hpp
 include/axom/quest/detail/PointInCellMeshWrapper_mfem.hpp
+include/axom/quest/detail/inout/BlockData.hpp
+include/axom/quest/detail/inout/InOutOctreeMeshDumper.hpp
+include/axom/quest/detail/inout/InOutOctreeStats.hpp
+include/axom/quest/detail/inout/InOutOctreeValidator.hpp
+include/axom/quest/detail/inout/MeshWrapper.hpp
 include/axom/quest/interface/inout.hpp
 include/axom/quest/interface/internal/QuestHelpers.hpp
 include/axom/quest/interface/internal/mpicomm_wrapper.hpp
 include/axom/quest/interface/signed_distance.hpp
-include/axom/quest/stl/STLReader.hpp
+include/axom/quest/readers/STLReader.hpp
 include/axom/sidre.hpp
 include/axom/sidre/core/Array.hpp
 include/axom/sidre/core/AttrValues.hpp
@@ -163,7 +211,6 @@ include/axom/slam/DynamicSet.hpp
 include/axom/slam/DynamicVariableRelation.hpp
 include/axom/slam/FieldRegistry.hpp
 include/axom/slam/IndirectionSet.hpp
-include/axom/slam/IteratorBase.hpp
 include/axom/slam/Map.hpp
 include/axom/slam/MapBase.hpp
 include/axom/slam/ModularInt.hpp
@@ -194,8 +241,23 @@ include/axom/slic/interface/slic.hpp
 include/axom/slic/interface/slic_macros.hpp
 include/axom/slic/internal/stacktrace.hpp
 include/axom/slic/streams/GenericOutputStream.hpp
+include/axom/sparsehash/README
+include/axom/sparsehash/dense_hash_map
+include/axom/sparsehash/dense_hash_set
+include/axom/sparsehash/internal/densehashtable.h
+include/axom/sparsehash/internal/hashtable-common.h
+include/axom/sparsehash/internal/libc_allocator_with_realloc.h
+include/axom/sparsehash/internal/sparseconfig.h
+include/axom/sparsehash/internal/sparseconfig.h.patch
+include/axom/sparsehash/internal/sparsehashtable.h
+include/axom/sparsehash/sparse_hash.header_path.patch
+include/axom/sparsehash/sparse_hash_map
+include/axom/sparsehash/sparse_hash_set
+include/axom/sparsehash/sparsetable
+include/axom/sparsehash/template_util.h
+include/axom/sparsehash/type_traits.h
 include/axom/spin.hpp
-include/axom/spin/BVHTree.hpp
+include/axom/spin/BVH.hpp
 include/axom/spin/Brood.hpp
 include/axom/spin/DenseOctreeLevel.hpp
 include/axom/spin/ImplicitGrid.hpp
@@ -206,22 +268,11 @@ include/axom/spin/RectangularLattice.hpp
 include/axom/spin/SparseOctreeLevel.hpp
 include/axom/spin/SpatialOctree.hpp
 include/axom/spin/UniformGrid.hpp
-include/fmt/LICENSE.rst
-include/fmt/README
-include/fmt/args.h
-include/fmt/chrono.h
-include/fmt/color.h
-include/fmt/compile.h
-include/fmt/core.h
-include/fmt/fmt.hpp
-include/fmt/format-inl.h
-include/fmt/format.h
-include/fmt/locale.h
-include/fmt/os.h
-include/fmt/ostream.h
-include/fmt/posix.h
-include/fmt/printf.h
-include/fmt/ranges.h
+include/axom/spin/internal/linear_bvh/RadixTree.hpp
+include/axom/spin/internal/linear_bvh/build_radix_tree.hpp
+include/axom/spin/internal/linear_bvh/bvh_traverse.hpp
+include/axom/spin/internal/linear_bvh/bvh_vtkio.hpp
+include/axom/spin/policy/LinearBVH.hpp
 lib/cmake/axom-config-version.cmake
 lib/cmake/axom-config.cmake
 lib/cmake/axom-targets-%%CMAKE_BUILD_TYPE%%.cmake