science/spheral: New port: Environment for hydrodynamical & gravitati…

…onal numerical simulations

science/Makefile

@@ -467,6 +467,7 @@
     SUBDIR += smoldyn
     SUBDIR += sparta
     SUBDIR += spglib
+    SUBDIR += spheral
     SUBDIR += step
     SUBDIR += svmlight
     SUBDIR += tblite

science/spheral/Makefile

@@ -0,0 +1,63 @@
+PORTNAME=	spheral
+DISTVERSIONPREFIX=	v
+DISTVERSION=	2022.6.1-680
+DISTVERSIONSUFFIX=	-g23ce0f156
+CATEGORIES=	science # physics
+
+MAINTAINER=	yuri@FreeBSD.org
+COMMENT=	Environment for hydrodynamical & gravitational numerical simulations
+WWW=		https://github.com/LLNL/spheral
+
+LICENSE=	BSD3CLAUSE
+LICENSE_FILE=	${WRKSRC}/License.txt
+
+BUILD_DEPENDS=	${LOCALBASE}/include/polyclipper2d.hh:math/polyclipper
+LIB_DEPENDS=	libaxom.so:science/axom \
+		libboost_filesystem.so:devel/boost-libs \
+		libconduit.so:science/conduit \
+		libhdf5.so:science/hdf5 \
+		libosdCPU.so:graphics/opensubdiv \
+		libpolytope.so:science/polytope \
+		libqhull_r.so:math/qhull \
+		libsiloh5.so:science/silo
+
+USES=		cmake compiler:c++14-lang eigen:3 fortran mpi:mpich python
+USE_LDCONFIG=	yes
+
+USE_GITHUB=	yes
+GH_ACCOUNT=	LLNL
+GH_TUPLE=	llnl:blt:ddd5a0c:blt/cmake/blt \
+		llnl:uberenv:126f8de:uberenv/scripts/devtools/uberenv
+
+CMAKE_ARGS=	-Daneos_DIR=${LOCALBASE} \
+		-Daxom_DIR=${LOCALBASE} \
+		-Dboost_DIR=${LOCALBASE} \
+		-Dconduit_DIR=${LOCALBASE} \
+		-Deigen_DIR=${LOCALBASE} \
+		-Dhdf5_DIR=${LOCALBASE} \
+		-Dopensubdiv_DIR=${LOCALBASE} \
+		-Dpython_DIR=${LOCALBASE} \
+		-Dpolytope_DIR=${LOCALBASE} \
+		-Dpybind11_DIR=${LOCALBASE} \
+		-Dqhull_DIR=${LOCALBASE} \
+		-Dsilo_DIR=${LOCALBASE} \
+		-Dzlib_DIR=/usr
+CMAKE_OFF=	ENABLE_TESTS ENABLE_DOCS \
+		ENABLE_ANEOS
+CMAKE_ON=	ENABLE_CXXONLY # disable Python support which is still for Python-2.7, see https://github.com/LLNL/spheral/issues/183
+
+CXXFLAGS+=	-I${LOCALBASE}/include/eigen3
+
+BINARY_ALIAS=	git=false python=${PYTHON_CMD}
+
+post-patch:
+	@${REINPLACE_CMD} -e 's|\.a|.so|; s|qhullstatic|qhull_r|; s|python2\.7|python${PYTHON_VER}|g' ${WRKSRC}/cmake/tpl/*.cmake
+	@${CHMOD} +x ${WRKSRC}/src/helpers/InstantiationGenerator.py
+
+post-install:
+	# workaround for https://github.com/LLNL/spheral/issues/188
+	@${MKDIR} ${STAGEDIR}${PREFIX}/lib/cmake
+	@${MV} ${STAGEDIR}${PREFIX}/Spheral/lib/cmake/* ${STAGEDIR}${PREFIX}/lib/cmake
+	@${RM} -r ${STAGEDIR}${PREFIX}/Spheral
+
+.include <bsd.port.mk>

science/spheral/distinfo

@@ -0,0 +1,7 @@
+TIMESTAMP = 1670638084
+SHA256 (LLNL-spheral-v2022.6.1-680-g23ce0f156_GH0.tar.gz) = 2287693db6e2b9c78cc8fc20b96e0b25571e660c371fec6f1cb2f14743629a82
+SIZE (LLNL-spheral-v2022.6.1-680-g23ce0f156_GH0.tar.gz) = 6529830
+SHA256 (llnl-blt-ddd5a0c_GH0.tar.gz) = 5c235a9b160f1cc3f6ce4d7c80bf72772ac10839909f4f96075d08b3edd8f540
+SIZE (llnl-blt-ddd5a0c_GH0.tar.gz) = 1220052
+SHA256 (llnl-uberenv-126f8de_GH0.tar.gz) = 6a403e722dc023d87dd69f8235fa631ab96a7b1ff328929b9c969e7c113ce9f7
+SIZE (llnl-uberenv-126f8de_GH0.tar.gz) = 25345

science/spheral/files/patch-src_helpers_InstantiationGenerator.py

@@ -0,0 +1,8 @@
+--- src/helpers/InstantiationGenerator.py.orig	2022-12-03 09:54:19 UTC
++++ src/helpers/InstantiationGenerator.py
+@@ -1,3 +1,5 @@
++#!/usr/bin/env python
++
+ #-------------------------------------------------------------------------------
+ # IntantiationGenerator
+ # 

science/spheral/pkg-descr

@@ -0,0 +1,6 @@
+Silo is a library for reading and writing a wide variety of scientific
+data to binary, disk files. The files Silo produces and the data within
+them can be easily shared and exchanged between wholly independently
+developed applications running on disparate computing platforms.
+Consequently, Silo facilitates the development of general purpose tools
+for processing scientific data.