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bio-mocha: Build plugin against bcftools 1.14, the current port
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Jason W. Bacon authored and Jason W. Bacon committed Dec 21, 2021
1 parent 2230392 commit 7a9f4b3
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6 changes: 4 additions & 2 deletions biology/bio-mocha/Makefile
@@ -1,24 +1,26 @@
PORTNAME= bio-mocha
DISTVERSION= 1.13
PORTREVISION= 1
CATEGORIES= biology
MASTER_SITES= https://software.broadinstitute.org/software/mocha/
DISTFILES+= ${PORTNAME}_${DISTVERSION}-20211015.tar.gz

MAINTAINER= jwb@FreeBSD.org
COMMENT= bcftools plugin for mosaic chromosomal alteration analysis
COMMENT= Bcftools plugin for mosaic chromosomal alteration analysis

LICENSE= MIT

LIB_DEPENDS= libhts.so:biology/htslib
BUILD_DEPENDS= bash:shells/bash
RUN_DEPENDS= bcftools==${PORTVERSION}:biology/bcftools
RUN_DEPENDS= bcftools>=${PORTVERSION}:biology/bcftools

USES= autoreconf gmake localbase perl5 python:env shebangfix
USE_GITHUB= yes
USE_PERL5= test

GH_ACCOUNT= samtools
GH_PROJECT= bcftools
GH_TAGNAME= 1.14
GNU_CONFIGURE= yes
SHEBANG_FILES= misc/* test/test.pl

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6 changes: 3 additions & 3 deletions biology/bio-mocha/distinfo
@@ -1,5 +1,5 @@
TIMESTAMP = 1638495618
TIMESTAMP = 1640100283
SHA256 (bio-mocha_1.13-20211015.tar.gz) = e145bb48fea347202e16395ab7d78e7e7314749b8d472a2071f8074004cd63a5
SIZE (bio-mocha_1.13-20211015.tar.gz) = 73627
SHA256 (samtools-bcftools-1.13_GH0.tar.gz) = 55fbc674ec69e243052e9fb6560eb43d06f45f210e1842ba4dbe33acb394e562
SIZE (samtools-bcftools-1.13_GH0.tar.gz) = 3133637
SHA256 (samtools-bcftools-1.13-1.14_GH0.tar.gz) = c9a814b1f0a13af19b45283f039d01b524e011d870ac95cd92e6907c3d1db6d1
SIZE (samtools-bcftools-1.13-1.14_GH0.tar.gz) = 3326994

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