biology/R-cran-Biobase: New port

Functions that are needed by many other packages or which replace R functions. WWW: https://bioconductor.org/packages/Biobase
freebsd · Dec 15, 2023 · 82e85eb · 82e85eb
1 parent 4cdc852
commit 82e85eb
Show file tree

Hide file tree

Showing 4 changed files with 24 additions and 0 deletions.
diff --git a/biology/Makefile b/biology/Makefile
@@ -1,5 +1,6 @@
     COMMENT = Biology
 
+    SUBDIR += R-cran-Biobase
     SUBDIR += R-cran-BiocGenerics
     SUBDIR += R-cran-BiocManager
     SUBDIR += abyss

diff --git a/biology/R-cran-Biobase/Makefile b/biology/R-cran-Biobase/Makefile
@@ -0,0 +1,19 @@
+PORTNAME=	Biobase
+PORTVERSION=	2.62.0
+CATEGORIES=	biology
+MASTER_SITES=	https://www.bioconductor.org/packages/release/bioc/src/contrib/
+DISTNAME=	${PORTNAME}_${PORTVERSION}
+
+MAINTAINER=	bofh@FreeBSD.org
+COMMENT=	Base functions for Bioconductor
+WWW=		https://bioconductor.org/packages/Biobase
+
+LICENSE=	ART20
+
+CRAN_DEPENDS=	R-cran-BiocGenerics>=0.27.1:biology/R-cran-BiocGenerics
+BUILD_DEPENDS=	${CRAN_DEPENDS}
+RUN_DEPENDS=	${CRAN_DEPENDS}
+
+USES=		cran:auto-plist,compiles
+
+.include <bsd.port.mk>
diff --git a/biology/R-cran-Biobase/distinfo b/biology/R-cran-Biobase/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1702637713
+SHA256 (Biobase_2.62.0.tar.gz) = ef753acc499c2504e226bf76e0acc08b7aa370fc60cc369bb8ebc1913f57d37e
+SIZE (Biobase_2.62.0.tar.gz) = 1795862
diff --git a/biology/R-cran-Biobase/pkg-descr b/biology/R-cran-Biobase/pkg-descr
@@ -0,0 +1 @@
+Functions that are needed by many other packages or which replace R functions.