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@FunctionLab

Troyanskaya Laboratory

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  1. onboarding onboarding Public

    Information for new Troyanskaya lab members

    4 1

  2. function function Public

    Python library for functional genomics

    Python 4 4

  3. selene selene Public

    a framework for training sequence-level deep learning networks

    Jupyter Notebook 374 87

  4. ExPecto ExPecto Public

    predicting expression effects of human genome variants ab initio from sequence

    Python 117 41

  5. sleipnir sleipnir Public

    C++ 3 1

Repositories

12 results for all repositories written in Python sorted by last updated
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Showing 10 of 12 repositories
  • asd-pheno-classes Public

    Scripts to generate figures and data.

    FunctionLab/asd-pheno-classes’s past year of commit activity
    Python 1 0 0 0 Updated Aug 15, 2024
  • tapioca Public

    a framework for predicting global protein-protein interaction networks from dynamic mass spec data

    FunctionLab/tapioca’s past year of commit activity
    Python 22 BSD-3-Clause-Clear 1 1 1 Updated Mar 20, 2024
  • function Public

    Python library for functional genomics

    FunctionLab/function’s past year of commit activity
    Python 4 GPL-3.0 4 0 2 Updated Jul 6, 2023
  • sei-framework Public

    code to run sei and obtain sei and sequence class predictions

    FunctionLab/sei-framework’s past year of commit activity
    Python 90 6 12 0 Updated Dec 20, 2022
  • yenta Public Forked from grapesmoker/yenta

    Yet 'Nother Taskrunner

    FunctionLab/yenta’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 24, 2022
  • ketl Public Forked from grapesmoker/ketl

    konfigurable etl

    FunctionLab/ketl’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Dec 21, 2021
  • DeepArk Public

    Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning

    FunctionLab/DeepArk’s past year of commit activity
    Python 16 BSD-3-Clause-Clear 3 1 0 Updated Apr 6, 2021
  • HeartENN-models Public

    Documentation and scripts to run HeartENN (Richter et al., 2020)

    FunctionLab/HeartENN-models’s past year of commit activity
    Python 1 BSD-3-Clause 2 0 0 Updated Dec 30, 2020
  • ExPecto Public

    predicting expression effects of human genome variants ab initio from sequence

    FunctionLab/ExPecto’s past year of commit activity
    Python 117 41 15 0 Updated Dec 21, 2020
  • flib Public
    FunctionLab/flib’s past year of commit activity
    Python 1 2 0 0 Updated Nov 18, 2020
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