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updated release notes
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rchikhi committed May 13, 2016
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# RELEASE 1.2.0

* Assembly-inspired de Bruijn graph simplifications are available using a single command.
* Assembly-inspired de Bruijn graph simplifications can be performed using a single command.

Here is an example:

// removes tips, bubbles and erroneous connections,
// similar to SPAdes algorithm
// similar to some of the algorithms implemented in the SPAdes assembler
graph.simplify();

* Faster graph traversal using a single command.
* Faster graph traversal can be activated using a single command.

Here is an example:

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optimum.setVal(0);

* Graph is now a templated object (GraphTemplate\<Node\_t, Edge\_t, GraphDataVariant\_t>) behind the scenes. However this change is transparent to users of previous versions of GATB-core, as compatibility with the Graph class is preserved.


* New implementation for the minimal perfect hash function (switched from emphf to BooPHF)

* Non-canonical k-mer counting is supported via "cmake -DNONCANONICAL=1"

* bug fixes in how queries with dir=DIR_INCOMING are handled.

* various minor bug fixes


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