change relative path in lenkf.j to abs path

GEOS-ESM · Mar 25, 2024 · 613980f · 613980f
1 parent bbdaaa7
commit 613980f
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Showing 2 changed files with 6 additions and 5 deletions.
diff --git a/src/Applications/LDAS_App/ldas_setup b/src/Applications/LDAS_App/ldas_setup
@@ -1392,7 +1392,8 @@ class LDASsetup:
                         if self.ladas_coupling > 0:
                            fout.write(line.replace('MY_ADAS_EXPDIR', self.rqdExeInp['ADAS_EXPDIR']))
                     else :
-                        fout.write(line.replace('MY_EXPDIR',self.exphome+'/$EXPID'))
+                        my_expdir = self.exphome + '/' + self.rqdExeInp['EXP_ID']
+                        fout.write(line.replace('MY_EXPDIR',my_expdir))
 
         sp.call(['chmod', '755', 'lenkf.j'])
 

diff --git a/src/Applications/LDAS_App/lenkf.j.template b/src/Applications/LDAS_App/lenkf.j.template
@@ -8,8 +8,8 @@
 #                     Batch Parameters for Run Job
 #######################################################################
 
-#SBATCH --output=../scratch/GEOSldas_log_txt
-#SBATCH --error=../scratch/GEOSldas_err_txt
+#SBATCH --output=MY_EXPDIR/scratch/GEOSldas_log_txt
+#SBATCH --error=MY_EXPDIR/scratch/GEOSldas_err_txt
 #SBATCH --account=MY_ACCOUNT
 #SBATCH --time=MY_WALLTIME
 #SBATCH --nodes=MY_NODES --ntasks-per-node=MY_NTASKS_PER_NODE
@@ -21,8 +21,8 @@
 #PBS -N MY_JOB
 #PBS -q MY_QOS
 #PBS -W group_list=MY_ACCOUNT
-#PBS -o ../scratch/GEOSldas_log_txt
-#PBS -e ../scratch/GEOSldas_err_txt
+#PBS -o MY_EXPDIR/scratch/GEOSldas_log_txt
+#PBS -e MY_EXPDIR/scratch/GEOSldas_err_txt
 #PBS -j oe     
 
 #######################################################################