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NEWS.md

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JBrowseR 0.10.2

  • Updated to @jbrowse/react-linear-genome-view@2.10.0
  • Adds support for lzma cram

JBrowseR 0.10.1

  • Updated to @jbrowse/react-linear-genome-view@2.6.2
  • Updated webpack build and dev dependencies

JBrowseR 0.10.0

  • Updated to @jbrowse/react-linear-genome-view@2.5.0
  • Updated to webpack 5
  • Fixed issue clicking features when running outside of Shiny

JBrowse 0.9.1

  • Updated to @jbrowse/react-linear-genome-view@2.0.1
  • Added a new function text_index() to provide support for text search.

JBrowseR 0.9.0

  • Updated to @jbrowse/react-linear-genome-view@1.4.4
  • Fixed the code example for track_wiggle().
  • Updated the URL for the hg38 to fix the CORS error from the old source.

JBrowseR 0.8.1

This release consists of updates to the JS side of the package:

  • Updated to @jbrowse/react-linear-genome-view@1.3.2. This includes:
    • new SVG export feature! 📸
    • a fix for better supporting Dialog components in the UI 🔨
    • performance improvements 🚀
    • better theming support (you can now change the colors of the bases!) 🎨
  • Updates the internal React components in the package based on new API changes to the React LGV

There are no changes to the R interface.

JBrowseR 0.8.0

  • Added the track_data_frame() track type. This makes it possible to create JB2 tracks directly from R data frames without any files.
  • Updated all views to now send Shiny messages to input$selectedFeature recorded what feature was clicked on. Check out the new example app bookmark_app.R for a demo!

JBrowseR 0.7.1

  • Updated URLS in Description to reflect new home in GMOD Github organization.
  • Updated to @jbrowse/react-linear-genome-view@1.0.4 (fixes issues with Safari and iOS compatibility).

JBrowseR 0.7.0

  • Initial package release!