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v1.3.4

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@felbecker felbecker released this 03 Feb 09:47
· 63 commits to main since this release

Added sequence cropping to accomodate very long outlies.
Previously, learnMSA would be very slow, if the input includes sequences many times longer than the average. This release provides a fix by implementing the command line option --crop x to crop inputs longer than x (defaulting to 3 times the average). Cropping can be disabled (the original behavior) with --crop disable.
Cropping does only affect model training, not the decoded MSA which will always respect the full input.