Overview

A toil based NGS workflow manager

Installation

git clone https://github.com/dgaston/ddb-ngsflow
cd ddb-ngsflow
python setup.py install

To run the all tests run:

tox

Note, to combine the coverage data from all the tox environments run:

Windows	`set PYTEST_ADDOPTS=--cov-append tox`
Other	`PYTEST_ADDOPTS=--cov-append tox`

Name		Name	Last commit message	Last commit date
Latest commit History 284 Commits
ci		ci
ddb_ngsflow		ddb_ngsflow
docs		docs
tests		tests
.bumpversion.cfg		.bumpversion.cfg
.cookiecutterrc		.cookiecutterrc
.coveragerc		.coveragerc
.editorconfig		.editorconfig
.gitignore		.gitignore
.travis.yml		.travis.yml
AUTHORS.rst		AUTHORS.rst
CHANGELOG.rst		CHANGELOG.rst
CONTRIBUTING.rst		CONTRIBUTING.rst
LICENSE		LICENSE
MANIFEST.in		MANIFEST.in
README.rst		README.rst
requirements.txt		requirements.txt
setup.cfg		setup.cfg
setup.py		setup.py
tox.ini		tox.ini