tests: fix bug in last commit #327
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| # lsqfitgp/workflows/tests.yml | |
| # | |
| # Copyright (c) 2022, 2023, Giacomo Petrillo | |
| # | |
| # This file is part of lsqfitgp. | |
| # | |
| # lsqfitgp is free software: you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published by | |
| # the Free Software Foundation, either version 3 of the License, or | |
| # (at your option) any later version. | |
| # | |
| # lsqfitgp is distributed in the hope that it will be useful, | |
| # but WITHOUT ANY WARRANTY; without even the implied warranty of | |
| # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | |
| # GNU General Public License for more details. | |
| # | |
| # You should have received a copy of the GNU General Public License | |
| # along with lsqfitgp. If not, see <http://www.gnu.org/licenses/>. | |
| name: tests | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| tests: | |
| if: github.repository == 'Gattocrucco/lsqfitgp' | |
| runs-on: ${{ matrix.os }} | |
| continue-on-error: ${{ matrix.experimental != '' }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: ["3.11"] | |
| include: | |
| - os: ubuntu-20.04 | |
| python-version: "3.8" | |
| - os: macos-11 | |
| python-version: "3.8" | |
| - os: windows-latest | |
| python-version: "3.11" | |
| experimental: true | |
| # do not run outdated tests on windows because only recent jax | |
| # versions support windows | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install package and dependencies | |
| if: matrix.python-version == '3.11' | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install '.[tests]' | |
| - name: Install package and outdated dependencies | |
| if: matrix.python-version == '3.8' | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install '.[tests-old]' | |
| - name: Run unit tests | |
| run: make COVERAGE_SUFFIX=-${{ matrix.os }}-py${{ matrix.python-version }} tests | |
| - name: Save coverage information | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage | |
| path: .coverage.tests-${{ matrix.os }}-py${{ matrix.python-version }} | |
| docs: | |
| runs-on: macos-latest | |
| # run on macos because of a linux bug which breaks docs/components4.png | |
| needs: tests | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.11" | |
| - name: Install package and dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install '.[docs]' | |
| - name: Run examples | |
| run: make COVERAGE_SUFFIX=-macos-latest-py3.11 examples | |
| - name: Run documentation code | |
| run: make COVERAGE_SUFFIX=-macos-latest-py3.11 docscode | |
| - name: Generate documentation | |
| run: make docs | |
| - name: Copy documentation to github pages | |
| if: github.event_name == 'push' | |
| uses: JamesIves/github-pages-deploy-action@v4.4.1 | |
| with: | |
| branch: gh-pages | |
| folder: docs/_build/html | |
| target-folder: docs | |
| - name: Get version number | |
| run: echo lsqfitgp_version=`python -c 'import re, lsqfitgp; print(re.fullmatch(r"(\d+(\.\d+)*)(.dev\d+)?", lsqfitgp.__version__).group(1))'` >> $GITHUB_ENV | |
| - name: Copy documentation to github pages (versioned directory) | |
| if: github.event_name == 'push' | |
| uses: JamesIves/github-pages-deploy-action@v4.4.1 | |
| with: | |
| branch: gh-pages | |
| folder: docs/_build/html | |
| target-folder: docs-${{ env.lsqfitgp_version }} | |
| - name: Save coverage from examples | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage | |
| path: .coverage.examples-macos-latest-py3.11 | |
| - name: Save coverage from tutorials | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage | |
| path: .coverage.docs-macos-latest-py3.11 | |
| postcov: | |
| runs-on: ubuntu-latest | |
| needs: [tests, docs] | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.11" | |
| - name: Install coverage | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install coverage | |
| - name: Get coverage files | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: coverage | |
| - name: List files | |
| run: | | |
| pwd | |
| ls -a | |
| ls src/lsqfitgp | |
| - name: Print coverage debug | |
| run: | | |
| coverage debug config | |
| coverage debug sys | |
| coverage debug data | |
| - name: Generate coverage report | |
| run: make covreport | |
| - name: Remove gitignore file | |
| run: rm htmlcov/.gitignore | |
| - name: Copy report to github pages | |
| if: github.event_name == 'push' | |
| uses: JamesIves/github-pages-deploy-action@v4.4.1 | |
| with: | |
| branch: gh-pages | |
| folder: htmlcov | |
| target-folder: htmlcov |