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feat: allow user to provide own chain file for pyliftover #136

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merged 1 commit into from
Mar 24, 2023

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korikuzma
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close #135

Notes:

  • Can set via UTADatabase parameters, environment variables (LIFTOVER_CHAIN_37_TO_38, LIFTOVER_CHAIN_38_TO_37), else will use pyliftover default methods to download from UCSC

- Can set via UTADatabase parameters, environment variables
  (LIFTOVER_CHAIN_37_TO_38, LIFTOVER_CHAIN_38_TO_37), else will use
pyliftover default methods to download from UCSC
@korikuzma korikuzma added enhancement New feature or request priority:high High priority labels Mar 24, 2023
@korikuzma korikuzma self-assigned this Mar 24, 2023
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@jsstevenson thanks for quick review 🙌

@korikuzma korikuzma merged commit 012ce1e into staging Mar 24, 2023
@korikuzma korikuzma deleted the issue-135 branch March 24, 2023 18:27
korikuzma added a commit that referenced this pull request Mar 24, 2023
- Can set via UTADatabase parameters, environment variables
  (LIFTOVER_CHAIN_37_TO_38, LIFTOVER_CHAIN_38_TO_37), else will use
pyliftover default methods to download from UCSC
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