Merge a60728f into caf9c8c

.coveragerc

@@ -8,9 +8,8 @@ omit =
     # omit these files
     pyrate/pyratelog.py
     pyrate/scripts/main.py
-    pyrate/aps.py
+    pyrate/pyaps.py
     pyrate/compat.py
-    *__init__*
 
 [report]
 # Regexes for lines to exclude from consideration
@@ -45,6 +44,7 @@ exclude_lines =
     raise PreprocessError
     raise TimeSeriesError
     raise OrbitalError
+    raise CorrectionStatusError
 
     # Don't complain if non-runnable code isn't run:
     if 0:

.gitignore

@@ -11,8 +11,14 @@ out
 .tox/
 build/
 docs/_build/
-tests/test_data/
+#tests/test_data/
 PyAPS/
 .cache/
 # .coverage tmp files
-.coverage.*
+.coverage.*
+.vscode/
+dist/
+*.egg-info/
+.installed.cfg
+*.egg
+*__pycache__/

.pylintrc

@@ -226,7 +226,7 @@ expected-line-ending-format=
 [BASIC]
 
 # Good variable names which should always be accepted, separated by a comma
-good-names=i,j,k,ex,Run,_,x,w,f,n,v,t,r,d,c,cd,g,r,q,V,m,A,b,log,y,id,ds,gt,md
+good-names=ts,i,j,k,ex,Run,_,x,w,f,n,v,t,r,d,c,cd,g,r,q,V,m,A,b,log,y,id,ds,gt,md
 
 # Bad variable names which should always be refused, separated by a comma
 bad-names=foo,bar,baz,toto,tutu,tata

.travis.yml

@@ -43,7 +43,7 @@ before_install:
   - pip install -U pip
   - pip install wheel
   - pip install python-daemon==2.1.1
-  - . ./scripts/travis_gdal_install.sh
+  - . ./utils/travis_gdal_install.sh
   - export PATH=$GDALINST/gdal-$GDALVERSION/bin:$PATH
   - export LD_LIBRARY_PATH=$GDALINST/gdal-$GDALVERSION/lib:$LD_LIBRARY_PATH
 
@@ -59,7 +59,8 @@ install:
 
 # command to run tests, e.g. python setup.py test
 script:
-  - py.test --cov-report term-missing:skip-covered --cov=pyrate tests/
+  - if [[ $TRAVIS_PYTHON_VERSION == 2.7 && $GDALVERSION == 2.0.0 ]]; then mpirun -n 4 pytest --cov-report term-missing:skip-covered --cov=pyrate tests/test_mpi.py; fi
+  - pytest --cov-report term-missing:skip-covered --cov=pyrate tests/
 
 cache:
   - apt

AUTHORS.rst

@@ -17,6 +17,7 @@ Contributors
 * Ben Davies (NCI)
 * Matt Garthwaite (GA)
 * Simon Knapp (GA)
+* Sarah Lawrie (GA)
 * Negin Moghaddam (GA)
 * Vanessa Newey (GA)
 * Garrick Paskos (GA)

CONTRIBUTING.rst

@@ -21,7 +21,7 @@ If you are reporting a bug, please include:
 * Any details about your local setup that might be helpful in troubleshooting.
 * Detailed steps to reproduce the bug.
 
-As an example of how to report a bug please see: https://github.com/GeoscienceAustralia/PyRate/issues/146
+For an example of how to report a bug please see: https://github.com/GeoscienceAustralia/PyRate/issues/146
 
 Fix Bugs
 ~~~~~~~~
@@ -57,10 +57,9 @@ If you are proposing a feature:
 Get Started!
 ------------
 
-Ready to contribute? Here's how to set up `PyRate` for
-local development.
+Ready to contribute? Here's how to set up `PyRate` for local development.
 
-1. Fork_ the `PyRate` repo on GitHub.
+1. Fork_ the `PyRate` repository on GitHub.
 2. Clone your fork locally::
 
     $ git clone git@github.com:GeoscienceAustralia/PyRate.git
@@ -71,13 +70,12 @@ local development.
 
 Now you can make your changes locally.
 
-4. When you're done making changes, check that your changes pass style and unit
+4. When you're finished making changes, check that your changes pass style and unit
    tests, including testing other Python versions with tox::
 
+    $ pip install tox
     $ tox
 
-To get tox, just pip install it.
-
 5. Commit your changes and push your branch to GitHub::
 
     $ git add .
@@ -94,11 +92,12 @@ Pull Request Guidelines
 Before you submit a pull request, check that it meets these guidelines:
 
 1. The pull request should include tests.
-2. If the pull request adds functionality, the docs should be updated. Put
-   your new functionality into a function with a docstring, and add the
+2. If the pull request adds functionality, the documentation should be updated.
+   Put your new functionality into a function with a docstring, and add the
    feature to the list in README.rst.
 3. The pull request should work for Python 2.7, and 3.3, 3.4, 3.5, 3.6, 3.7
     and for PyPy.
+
    Check https://travis-ci.org/GeoscienceAustralia/PyRate
    under pull requests for active pull requests or run the ``tox`` command and
    make sure that the tests pass for all supported Python versions.

HISTORY.rst

@@ -1,9 +1,14 @@
 .. :changelog:
 
-History
--------
+Release History
+---------------
 
 0.1.0 (2017-01-31)
 ++++++++++++++++++
 
 * First release on PyPI.
+
+0.2.0 (2017-05-22)
+++++++++++++++++++
+
+* Stable beta release.