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correct syntax error
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ploy-np committed Feb 16, 2021
1 parent 4fa705c commit 421af6b
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions xpore/scripts/dataprep.py
Original file line number Diff line number Diff line change
Expand Up @@ -541,8 +541,8 @@ def preprocess_tx(tx_id,data_dict,out_paths,locks): # todo
f.write(log_str + '\n')


def index_nanopolish(eventalign_filepath,summary_filepath,out_dir,n_processes):
with helper.EventalignFile(eventalign_filepath) as eventalign_file, open(summary_filepath,'r') as summary_file:
# def index_nanopolish(eventalign_filepath,summary_filepath,out_dir,n_processes):
# with helper.EventalignFile(eventalign_filepath) as eventalign_file, open(summary_filepath,'r') as summary_file:

# reader_summary = csv.DictReader(summary_file, delimiter="\t")
# reader_eventalign = csv.DictReader(eventalign_file, delimiter="\t")
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