Skip to content

Commit

Permalink
fixed test syntax error
Browse files Browse the repository at this point in the history
  • Loading branch information
emhart committed Feb 18, 2015
1 parent 88a8df8 commit 68728c9
Show file tree
Hide file tree
Showing 2 changed files with 6 additions and 14 deletions.
8 changes: 0 additions & 8 deletions R/metrics.R
Original file line number Diff line number Diff line change
Expand Up @@ -234,14 +234,6 @@ czekanowski_skew <- function(m=matrix(rpois(80,1),nrow=10))
return(czekanowskiSkew)
}

##
##


# Co-occurrence algorithms and metrics for testing
# 25 May 2013
# NJG

#' Number of species combinations
#' @description Function to calculate number of unique species combinations in a matrix
#' @details In Diamond's (1975) assembly rules model, species interactions lead to
Expand Down
12 changes: 6 additions & 6 deletions tests/testthat/test_nichebreadth.R
Original file line number Diff line number Diff line change
Expand Up @@ -39,43 +39,43 @@ test_that("ra4 algorithm works:",{
}
)

test_that("pianka metric works:"{
test_that("pianka metric works:",{
expect_true(is.numeric(pianka(ra1())))
expect_true(is.numeric(pianka(ra4(macwarb[,2:5]))))
expect_true(pianka(ra4(macwarb[,2:5])) > .5 )

})

test_that("czekanowski metric works:"{
test_that("czekanowski metric works:",{
expect_true(is.numeric(czekanowski(ra1())))
expect_true(is.numeric(czekanowski(ra4(macwarb[,2:5]))))
expect_true(czekanowski(ra4(macwarb[,2:5])) > .5 )

})

test_that("pianka_var metric works:"{
test_that("pianka_var metric works:",{
expect_true(is.numeric(pianka_var(ra1())))
expect_true(is.numeric(pianka_var(ra4(macwarb[,2:5]))))
expect_true(pianka_var(ra4(macwarb[,2:5])) < .5 )

})


test_that("czekanowski_var metric works:"{
test_that("czekanowski_var metric works:",{
expect_true(is.numeric(czekanowski_var(ra1())))
expect_true(is.numeric(czekanowski_var(ra4(macwarb[,2:5]))))
expect_true(czekanowski_var(ra4(macwarb[,2:5])) < .5 )

})

test_that("pianka_skew metric works:"{
test_that("pianka_skew metric works:",{
expect_true(is.numeric(pianka_skew(ra1())))
expect_true(is.numeric(pianka_skew(ra4(macwarb[,2:5]))))

})


test_that("czekanowski_skew metric works:"{
test_that("czekanowski_skew metric works:",{
expect_true(is.numeric(czekanowski_skew(ra1())))
expect_true(is.numeric(czekanowski_skew(ra4(macwarb[,2:5]))))
})
Expand Down

0 comments on commit 68728c9

Please sign in to comment.