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cosymlib scripts now use xyz files as reference polyhedron
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shape_classic still works as before
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efrembernuz committed Jan 30, 2020
1 parent f149273 commit 495fd22
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion scripts/cosym
Original file line number Diff line number Diff line change
Expand Up @@ -167,7 +167,7 @@ if args.shp_labels:
reference_polyhedron = []
if args.shp_measure == 'custom':
reference_polyhedron = file_io.get_molecule_from_file_xyz(args.custom_ref)
[x.set_positions(args.central_atom-1) for x in reference_polyhedron]
[x.set_positions(args.central_atom - 1) for x in reference_polyhedron]
elif not reference_polyhedron:
if args.shp_measure == 'all':
try:
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