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Releases: HGGM-LIM/jclustering

Version 1.3.0

22 Aug 10:03
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  • Removed all methods and variables related to noisy TAC skipping.

Version 1.2.6

21 Aug 16:01
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  • Fixed a bug in k-means++ initialization distance computation.

Version 1.2.5

08 Aug 09:08
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  • SVD did not work if the soon-to-be-deprecated (hopefully) skip_noisy was not set to true.
  • The logic for not returning masked voxels did not work as expected. Fixed.
  • ImagePlusHypIterator rewritten (nasty bug showed up when correct pixel masking was implemented).

Version 1.2.4

05 Aug 09:17
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  • ImagePlusHypIterator does not return masked voxels
  • Added isMasked(Voxel v) and isMasked(double [] tac) to MathUtils
  • K-means initialization algorithms do not choose masked voxels
  • Skip noisy voxels is now set to false (might be deprecated in the future).
  • LeaderFollower number of clusters is 50 by default (from 1000).
  • ImagePlusHyp is now just a wrapper for ImagePlus, but does not extend it. This avoids duplicating the memory used by the analyzed image.

Version 1.2.3

16 Jul 12:39
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  • Added "About" panel.
  • Included deterministic k-means++ initialization.
  • Fixed Leader-Follower bug.
  • Added RMSD metric.

Version 1.2.2

22 Jul 09:46
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  • PCA can now be computed on the correlation matrix instead of the covariance.
  • Additional images from PCA, ICA and SVD use a floating point format.

Version 1.2.1

22 Jul 09:47
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  • Fixed bug: number of components was ignored in ICA.

Version 1.2.0

22 Jul 09:48
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  • ClusteringTechniques can now return a formatted string array that will be saved as additional information.
  • Added ICA implementation thanks to the fastICA library by Michael Lambertz.
  • Added SVD implementation.

Version 1.1.9

22 Jul 09:48
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  • Added an option for displaying the PCA image in the PCA technique.
  • PCA computation now uses SVD on the covariance matrix instead of obtaining
    the eigenvectors manually.

Version 1.1.8

22 Jul 09:49
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  • Fixed yet another major bug in LeaderFollower implementation.
  • cluster image now has correct voxel size information.