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@HanLabUNLV

HanLabUNLV

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  1. TEDetection TEDetection Public

    Detects Transposable Elements in whole genome sequencing data

    Python 4

  2. Phasterate Phasterate Public

    Phylogenetic Analysis Tool Extended With Indel Events

    C 2

  3. tetoolkit tetoolkit Public

    Forked from mhammell-laboratory/TEtranscripts

    forked from mhammell-laboratory/tetoolkit to add function to reduce the TE read counts coming from pre-mrnas or retained introns

    Python 2 1

  4. TEcoex TEcoex Public

    transposable element co-expression analysis

    R 2

  5. RSEM RSEM Public

    Forked from deweylab/RSEM

    RSTEEM: TE quantification based on RSEM

    C++ 1

  6. PhasterateData PhasterateData Public

    Data For Phasterate Paper

    AMPL

Repositories

Showing 10 of 17 repositories
  • sleps Public

    Supervised Learning of Enhancer Promoter Specificity.

    HanLabUNLV/sleps’s past year of commit activity
    Python 0 0 0 1 Updated Jun 12, 2024
  • SCC Public
    HanLabUNLV/SCC’s past year of commit activity
    R 0 0 0 0 Updated Jun 4, 2024
  • transcriptomic_predictions Public

    Jupyter Notebooks to accompany the manuscript: "A comparison of RNA-Seq data preprocessing pipelines for transcriptomic predictions"

    HanLabUNLV/transcriptomic_predictions’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 30, 2024
  • hanlab_singularity_defs Public

    definition files for containers used in Hanlab

    HanLabUNLV/hanlab_singularity_defs’s past year of commit activity
    R 0 0 0 0 Updated Mar 25, 2022
  • HIDL Public

    homologous inter-domain linkers

    HanLabUNLV/HIDL’s past year of commit activity
    R 0 0 0 0 Updated Mar 31, 2021
  • linker-region-website Public Forked from adrian-alberto/linker-region-website

    Website for querying linker regions for Hanlab @ UNLV

    HanLabUNLV/linker-region-website’s past year of commit activity
    PHP 0 1 0 0 Updated Nov 12, 2019
  • Phasterate Public

    Phylogenetic Analysis Tool Extended With Indel Events

    HanLabUNLV/Phasterate’s past year of commit activity
    C 2 0 0 0 Updated Aug 9, 2019
  • hanlabunlv.github.io Public Forked from mmistakes/minimal-mistakes

    📐 Jekyll theme for personal sites, blogs, and portfolios. Two-columns and extremely flexible.

    HanLabUNLV/hanlabunlv.github.io’s past year of commit activity
    JavaScript 0 25,194 0 0 Updated Jul 18, 2019
  • Archived-R-files Public Forked from quintsoph/Archived-R-files

    I have uploaded all my archived R files from over the years.

    HanLabUNLV/Archived-R-files’s past year of commit activity
    R 0 2 0 0 Updated Jun 6, 2019
  • RSEM Public Forked from deweylab/RSEM

    RSTEEM: TE quantification based on RSEM

    HanLabUNLV/RSEM’s past year of commit activity
    C++ 1 GPL-3.0 118 0 0 Updated May 28, 2019
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