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Releases: Harvard-ACMG/cannon-env

cannon-env 2.0.5

13 May 15:03
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Release date: 13 May 2024

CHANGELOG

Fixed

  • Now use if statements instead of [[ -f ~/.bash_aliases ]] etc. are present in the root folder. These cause an error code to persist as described in #3.

cannon-env 2.0.4

25 Mar 14:35
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Release date: 25 Mar 2024

CHANGELOG

Added

  • Module load commands for the Spack-built rclone package

Full Changelog: 2.0.3...2.0.4

cannon-env 2.0.3

30 Jan 21:46
f2c4fa9
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Release date: 30 Jan 2024

What's Changed

  • Add alias "sainfo" to get information on sapphire partition by @msulprizio in #2

New Contributors

Full Changelog: 2.0.2...2.0.3

cannon-env 2.0.2

04 Jan 19:35
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Release date: 04 Jan 2024

CHANGELOG

Fixed

  • Updated VT100 keybindings in .root/.Xresources to allow CTRL-INSERT (cut) and SHIFT-INSERT (paste)

Full Changelog: 2.0.1...2.0.2

cannon-env 2.0.1

15 Dec 15:47
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Release date 15 Dec 2023

CHANGELOG

Fixed

  • Removed the && ssh -CY $SLURM_JOB_NODELIST, as this was causing some X11 forwarding issues after the update to SLURM 23.02.7

Full Changelog: 2.0.0...2.0.1

cannon-env 2.0.0

14 Sep 15:38
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CHANGELOG

Added

  • Environment files for Intel compilers in envs/intel23
  • README.md files in envs/gnu10, envs/gnu12, envs/intel23
  • Now load Spack-built modules for jq and parallel

Changed

  • The envs folder has been subdivided into gnu10, gnu12, and intel23 subdirectories
  • Moved content from envs/README.md to README.md in subdirectories
  • GCHP environment files now point to ESMF 8.4.2 installation
  • Unload all packages loaded with spack load in environment files
  • Send the output of unalias diff to /dev/null to squelch error messages
  • Added extra xterm settings and font selections in root/.Xresources
  • Rewrote copy_cannon_env to back up configuration files
  • Updated root/.Xresources with additional options and font selections
  • .bash_profile, .bashrc, etc. files are now chmod 644
  • Updated bin/myjobs to exclude job ID's ending in .1, .2, etc.
  • The bin/interactive script uses --mem instead of --mem-per-cpu
  • Updated env files for the new library path /n/jacob_lab/Lab/RockyLinux/
  • Updated README.md files accordingly

Removed

  • Removed the ROCKY_ROOT variable from environment files

What's Changed

  • Check if spack is found before calling spack unload in minimal env files by @lizziel in #1

New Contributors

Full Changelog: 1.0.0...2.0.0

cannon-env 1.0.0

05 Jun 20:16
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Release Date: 05 Jun 2023

CHANGELOG

Added

  • Environment files for RockyLinux (w/ FASRC + Spack modules) in envs/*
  • Added logo and links to the README.md file
  • Added CHANGELOG.md file
  • Added LICENSE.txt file
  • Added environment files that only load FASRC-built packages
  • Added ROCKY_ROOT to env files (points to RockyLinux library root folder)

Changed

  • Move Spack intitialization and module path updates to top of environment file scripts
  • Add more informational messages in environment files
  • Make sure NETCDF_HOME is defined properly in environment files
  • Do not load CDO module in environment files, use "spack load" instead
  • Explicitly load netcdf-c in module files
  • Updated envs/README.md with a table of env files, plus subsections
  • Now load FASRC-built IDL module in GCClassic environment files
  • Renamed *.nospack.env environment files to *.minimal.env

Removed

  • Environment files for CentOS (w/ FASRC modules) in envs/*

Full Changelog: 0.1.0...1.0.0

cannon-env 0.1.0

03 May 20:27
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Release date: 23 Feb 2023

Overview

This version (0.1.0) is the "status quo" for Cannon configuration files under CentOS7.

Version 0.1.0 will be superseded by version 1.0.0, which will contain configuration files for RockyLinux 8.7.