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Juelich 2024 #32

Closed
wants to merge 194 commits into from
Closed

Juelich 2024 #32

wants to merge 194 commits into from

Commits on Oct 11, 2023

  1. add and modify colab section

    @donatella-cea
    donatella-cea committed Oct 11, 2023
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  2. add first version LIME tutorial

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    donatella-cea committed Oct 11, 2023
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Commits on Oct 12, 2023

  1. attention map on images

    @sab148
    sab148 committed Oct 12, 2023
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Commits on Oct 27, 2023

  1. attnetion tutorial

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    sab148 committed Oct 27, 2023
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  2. fixing figure

    @sab148
    sab148 committed Oct 27, 2023
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  3. add the image

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    sab148 committed Oct 27, 2023
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Commits on Oct 30, 2023

  1. add model description, address warning on model weights

    @donatella-cea
    donatella-cea committed Oct 30, 2023
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  2. more explanations

    @sab148
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  3. Merge branch 'Juelich-2023' of https://github.com/HelmholtzAI-Consult… 

    …ants-Munich/XAI-Tutorials into Juelich-2023
    @sab148
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  4. move batch_predict to utils

    @donatella-cea
    donatella-cea committed Oct 30, 2023
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  5. Merge branch 'Juelich-2023' of https://github.com/HelmholtzAI-Consult… 

    …ants-Munich/Zero2Hero---Introduction-to-XAI into Juelich-2023
    @donatella-cea
    donatella-cea committed Oct 30, 2023
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  6. arrange image

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    sab148 committed Oct 30, 2023
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  7. Merge branch 'Juelich-2023' of https://github.com/HelmholtzAI-Consult… 

    …ants-Munich/XAI-Tutorials into Juelich-2023
    @sab148
    sab148 committed Oct 30, 2023
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  8. add image

    @sab148
    sab148 committed Oct 30, 2023
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  9. add image

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    sab148 committed Oct 30, 2023
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  10. add pred probability top 5 classes

    @donatella-cea
    donatella-cea committed Oct 30, 2023
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Commits on Nov 8, 2023

  1. cam for signals

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  2. Merge branch 'Juelich-2023' of https://github.com/HelmholtzAI-Consult… 

    …ants-Munich/XAI-Tutorials into Juelich-2023
    @sab148
    sab148 committed Nov 8, 2023
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  3. first draft cam tutorial

    @sab148
    sab148 committed Nov 8, 2023
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  4. render changes

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    sab148 committed Nov 8, 2023
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  5. description changes

    @sab148
    sab148 committed Nov 8, 2023
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  6. ahh image and fix the math markdown

    @sab148
    sab148 committed Nov 8, 2023
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  7. fix math markdown

    @sab148
    sab148 committed Nov 8, 2023
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  8. arrange the structure

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    sab148 committed Nov 8, 2023
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Commits on Nov 10, 2023

  1. add colab section

    @donatella-cea
    donatella-cea committed Nov 10, 2023
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  2. add colab section

    @donatella-cea
    donatella-cea committed Nov 10, 2023
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Commits on Nov 12, 2023

  1. tutorial transformers

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    sab148 committed Nov 12, 2023
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  2. Merge branch 'Juelich-2023' of https://github.com/HelmholtzAI-Consult… 

    …ants-Munich/XAI-Tutorials into Juelich-2023
    @sab148
    sab148 committed Nov 12, 2023
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Commits on Nov 13, 2023

  1. tutorial transformers

    @sab148
    sab148 committed Nov 13, 2023
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  2. improved version

    @sab148
    sab148 committed Nov 13, 2023
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  3. added one more sub section

    @sab148
    sab148 committed Nov 13, 2023
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  4. tutorial vit

    @sab148
    sab148 committed Nov 13, 2023
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  5. add vit image

    @sab148
    sab148 committed Nov 13, 2023
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  6. change encoder part

    @sab148
    sab148 committed Nov 13, 2023
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  7. add theoretical details

    @donatella-cea
    donatella-cea committed Nov 13, 2023
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Commits on Nov 14, 2023

  1. finish lime for images, add lime to comparison notebook

    @donatella-cea
    donatella-cea committed Nov 14, 2023
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Commits on Nov 16, 2023

  1. add the cell to download the dataset

    @sab148
    sab148 committed Nov 16, 2023
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  2. remove warnings

    @sab148
    sab148 committed Nov 16, 2023
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  3. cam for each class

    @sab148
    sab148 committed Nov 16, 2023
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  4. remove warnings

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    sab148 committed Nov 16, 2023
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Commits on Nov 17, 2023

  1. change weight name, tutorial attention text

    @sab148
    sab148 committed Nov 17, 2023
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Commits on Nov 20, 2023

  1. finished attention tutorial

    @sab148
    sab148 committed Nov 20, 2023
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Commits on Nov 21, 2023

  1. Francesco suggestions replied

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    sab148 committed Nov 21, 2023
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  2. typos corrections

    @sab148
    sab148 committed Nov 21, 2023
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  3. more typos corrections

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    sab148 committed Nov 21, 2023
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  4. grad-cam vs cam

    @sab148
    sab148 committed Nov 21, 2023
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Commits on Nov 22, 2023

  1. fransesco suggestions on cam

    @sab148
    sab148 committed Nov 22, 2023
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  2. ecg training and correct typos

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    sab148 committed Nov 22, 2023
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Commits on Nov 23, 2023

  1. restructure repo, add colab sections

    @donatella-cea
    donatella-cea committed Nov 23, 2023
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  2. update colab link

    @donatella-cea
    donatella-cea committed Nov 23, 2023
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  3. dona suggestions

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    sab148 committed Nov 23, 2023
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  4. update requirements file

    @sab148
    sab148 committed Nov 23, 2023
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Commits on Nov 24, 2023

  1. upload weights

    @sab148
    sab148 committed Nov 24, 2023
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  2. fixed image

    @sab148
    sab148 committed Nov 24, 2023
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  3. fixe more images

    @sab148
    sab148 committed Nov 24, 2023
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  4. fiz image sizes for collab

    @sab148
    sab148 committed Nov 24, 2023
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  5. fix embedding image size

    @sab148
    sab148 committed Nov 24, 2023
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  6. colab link

    @donatella-cea
    donatella-cea committed Nov 24, 2023
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  7. typos

    @donatella-cea
    donatella-cea committed Nov 24, 2023
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  8. fixed postion of code

    @sab148
    sab148 committed Nov 24, 2023
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  9. add extra session, add seeds

    @donatella-cea
    donatella-cea committed Nov 24, 2023
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Commits on Nov 28, 2023

  1. add exercise SHAP

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    donatella-cea committed Nov 28, 2023
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  2. Update README.md

    @donatella-cea
    donatella-cea committed Nov 28, 2023
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Commits on Nov 29, 2023

  1. changed code to add residuals

    @sab148
    sab148 committed Nov 29, 2023
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  2. Merge branch 'Juelich-2023' of https://github.com/HelmholtzAI-Consult… 

    …ants-Munich/XAI-Tutorials into Juelich-2023
    @sab148
    sab148 committed Nov 29, 2023
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  3. add reference

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    sab148 committed Nov 29, 2023
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  4. more changes to materials

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    sab148 committed Nov 29, 2023
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  5. correct typo, add explanations

    @donatella-cea
    donatella-cea committed Nov 29, 2023
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Commits on Nov 30, 2023

  1. change example

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  2. Update Tutorial_LIME_Images.ipynb 

    fixes typos and improves language
    @neuronflow
    neuronflow committed Nov 30, 2023
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Commits on Dec 1, 2023

  1. correct typo

    @donatella-cea
    donatella-cea committed Dec 1, 2023
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  2. Merge pull request #8 from HelmholtzAI-Consultants-Munich/neuronflow-… 

    …patch-1

Update Tutorial_LIME_Images.ipynb
    @donatella-cea
    donatella-cea committed Dec 1, 2023
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  3. remove solutions

    @donatella-cea
    donatella-cea committed Dec 1, 2023
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  4. remove answers

    @donatella-cea
    donatella-cea committed Dec 1, 2023
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  5. remove answers

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    donatella-cea committed Dec 1, 2023
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  6. remove answers

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    donatella-cea committed Dec 1, 2023
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  7. remove answers

    @donatella-cea
    donatella-cea committed Dec 1, 2023
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  8. remove answers

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    donatella-cea committed Dec 1, 2023
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  9. remove answers

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    donatella-cea committed Dec 1, 2023
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  10. remove answers

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    donatella-cea committed Dec 1, 2023
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  11. remove answers, clear output

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    donatella-cea committed Dec 1, 2023
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  12. Update README.md requirement section

    @donatella-cea
    donatella-cea committed Dec 1, 2023
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Commits on Dec 3, 2023

  1. cam explanations

    @sab148
    sab148 committed Dec 3, 2023
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  2. to markdown

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    sab148 committed Dec 3, 2023
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  3. fix math in the text

    @sab148
    sab148 committed Dec 3, 2023
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  4. fix math formulas

    @sab148
    sab148 committed Dec 3, 2023
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  5. fix spacing

    @sab148
    sab148 committed Dec 3, 2023
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  6. add modifications for attetion maps

    @sab148
    sab148 committed Dec 3, 2023
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  7. ad new image

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    sab148 committed Dec 3, 2023
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Commits on Dec 4, 2023

  1. Update Tutorial_SHAP.ipynb 

    fixes language problems
    @neuronflow
    neuronflow committed Dec 4, 2023
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  2. Merge pull request #9 from HelmholtzAI-Consultants-Munich/neuronflow-… 

    …patch-1

Update Tutorial_SHAP.ipynb
    @neuronflow
    neuronflow committed Dec 4, 2023
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  3. Update Tutorial_Grad-CAM.ipynb 

    language improvements
    @neuronflow
    neuronflow committed Dec 4, 2023
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  4. Merge pull request #10 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-2

Update Tutorial_Grad-CAM.ipynb
    @neuronflow
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  5. Update Tutorial_SHAP.ipynb 

    lingual improvements
    @neuronflow
    neuronflow committed Dec 4, 2023
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  6. Merge pull request #14 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-5

Update Tutorial_SHAP.ipynb
    @neuronflow
    neuronflow committed Dec 4, 2023
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  7. Update Tutorial_PermutationFeatureImportance.ipynb 

    language improvements
    @neuronflow
    neuronflow committed Dec 4, 2023
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  8. Add sklearn to requirements

    @IsraMekki0
    IsraMekki0 committed Dec 4, 2023
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  9. Update Tutorial_PermutationFeatureImportance.ipynb 

    more language fixes
    @neuronflow
    neuronflow committed Dec 4, 2023
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  10. Merge pull request #15 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-6

Update Tutorial_PermutationFeatureImportance.ipynb
    @neuronflow
    neuronflow committed Dec 4, 2023
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  11. Update Tutorial_SHAP.ipynb 

    lingual improvements
    @neuronflow
    neuronflow committed Dec 4, 2023
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  12. Merge pull request #16 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-7

Update Tutorial_SHAP.ipynb
    @neuronflow
    neuronflow committed Dec 4, 2023
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  13. Update requirements.txt

    @IsraMekki0
    IsraMekki0 committed Dec 4, 2023
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  14. Update Tutorial_LIME.ipynb 

    language fixes
    @neuronflow
    neuronflow committed Dec 4, 2023
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  15. Merge pull request #17 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-8

Update Tutorial_LIME.ipynb
    @neuronflow
    neuronflow committed Dec 4, 2023
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  16. Update Tutorial_LIME.ipynb 

    language improvements
    @neuronflow
    neuronflow committed Dec 4, 2023
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  17. Merge pull request #18 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-9

Update Tutorial_LIME.ipynb
    @neuronflow
    neuronflow committed Dec 4, 2023
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  18. Update Tutorial_FGC.ipynb 

    typos and language improvements
    @neuronflow
    neuronflow committed Dec 4, 2023
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  19. Merge pull request #19 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-10

Update Tutorial_FGC.ipynb
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  20. lang 

    Signed-off-by: neuronflow <7048826+neuronflow@users.noreply.github.com>
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  21. Update Tutorial_Grad-CAM.ipynb 

    clarity
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  22. Update Tutorial_Grad-CAM.ipynb 

    lang
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  23. Update Tutorial_SHAP_Images.ipynb 

    language improvements for shap
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  24. Merge pull request #21 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-11

Update Tutorial_SHAP_Images.ipynb
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  25. Update Tutorial_LIME_Images.ipynb 

    lime lang improvements
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  26. Merge pull request #22 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-12

Update Tutorial_LIME_Images.ipynb
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  27. Update Tutorial_XAI_for_ImageAnalysis.ipynb 

    IA lang improvements
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  28. Merge pull request #23 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-13

Update Tutorial_XAI_for_ImageAnalysis.ipynb
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  29. Update README.md 

    language
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  30. Merge pull request #24 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-14

Update README.md
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  31. Update Model-Transformers.ipynb 

    language improvements for transformers
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  32. Merge pull request #25 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-15

Update Model-Transformers.ipynb
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  33. Update Tutorial_attention_map_for_text.ipynb 

    language for attention maps
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  34. Merge pull request #26 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-16

Update Tutorial_attention_map_for_text.ipynb
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  35. Update Model-VIT.ipynb 

    language fixes for VIT
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  36. Merge pull request #27 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-17

Update Model-VIT.ipynb
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  37. language fixes 

    Signed-off-by: neuronflow <7048826+neuronflow@users.noreply.github.com>
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  38. Merge pull request #28 from HelmholtzAI-Consultants-Munich/language_a… 

    …ttention_text

language fixes
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  39. lang 

    Signed-off-by: neuronflow <7048826+neuronflow@users.noreply.github.com>
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  40. Merge pull request #30 from HelmholtzAI-Consultants-Munich/lang_cam_s… 

    …ignals

lang
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  41. Merge pull request #20 from HelmholtzAI-Consultants-Munich/feature_vi… 

    …z_language_corrections

lang
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  42. resolve merge conflict

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  43. Merge pull request #13 from HelmholtzAI-Consultants-Munich/neuronflow… 

    …-patch-4

Neuronflow patch 4
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  44. add intro slides

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Commits on Dec 5, 2023

  1. add lime installation

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  2. Changed normal examples

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  3. Corrected previous commit

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Commits on Dec 6, 2023

  1. add weights

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  2. rename weights file

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  3. fix weights path in attention maps for text

    @sab148
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  4. modify link to last image

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  5. modify link to last image

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Commits on Dec 8, 2023

  1. add answers

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  2. add answers

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  3. add answers

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  4. add answers

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  5. add answers

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  6. add answers

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  7. add answers

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  8. add answers

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  9. add answers

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Commits on Apr 12, 2024

  1. restructure repo

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  2. Delete Introduction_to_XAI_Juelich_2023.pdf

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  3. Update README.md

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Commits on Apr 26, 2024

  1. Update README.md

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Commits on Apr 29, 2024

  1. grad cam for signals

    @sab148
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  2. remove cam tutorial

    @sab148
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  3. change name of tutorial

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Commits on Apr 30, 2024

  1. update colab link

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  2. update colab link

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  3. update colab link

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  1. change colab link

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  2. change colab link

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  3. change colab link

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  4. change colab link

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  5. change colab link

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  6. change colab link

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  7. change colab link

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  8. change colab link

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  9. change colab link

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  10. change colab link

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  11. change colab link

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  12. change colab link

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  13. change colab link

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  14. change colab link

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  15. rename notebook, change colab link

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  16. Update README.md

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Commits on May 3, 2024

  1. add gradient explainer explanation

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  2. moved transformer theory to rtd

    @lisa-sousa
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  3. add GradientExplainer explanation

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  4. t5 weights for German

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  5. ECG test data

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Commits on May 6, 2024

  1. Corrected paths

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Commits on May 7, 2024

  1. fig bug in get_prediction() and remove folder

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  2. Merge branch 'Juelich-2024' of https://github.com/HelmholtzAI-Consult… 

    …ants-Munich/XAI-Tutorials into Juelich-2024
    @sab148
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  3. add test data for signals

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  4. change location of test data

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  5. german english weights

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  6. remove weights

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  7. training transformer for english german translation

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  8. change weights name

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  9. zip location changed

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Commits on May 8, 2024

  1. Merge branch 'Juelich-2024' of github.com:HelmholtzAI-Consultants-Mun… 

    …ich/XAI-Tutorials into Juelich-2024-corrections
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  2. Download model weights from google drive

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  3. Merge pull request #31 from HelmholtzAI-Consultants-Munich/Juelich-20… 

    …24-corrections

Corrected paths
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