Install of python3 including numpy, scipy, and matplotlib is expected. Pycircstat library is used, code needs to be built for your machine. See their documentation at https://github.com/circstat/pycircstat.
Special files:
model.py
— contains all inference machinery
myutils.py
— contains utils and params used in simulations
All other files are simulations. When you run a simulation (e.g., python cuevariance.py
), figures will be output into the figures folder. An easy way to run all of the simulations (except for the simulations included in partitionParams.py
) is to run runall.py
.
If you want to run all the simulations for the paper,
python runall.py
python partitionParams.py