This is the workflow that generates the data analysis results and figures presented in the manuscript "Inferring patient-specific cancer dependencies through integrating ex-vivo drug response assays and drug-protein profiling" by Batzilla and Lu et al. Users can also use the associated source code to reproduce all results and figures in the manuscript.

The rendered documents can be accessed through: https://www.huber.embl.de/users/jlu/depInfeR/index.html