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Releases: HumanCellAtlas/pipeline-tools

v0.59.0

04 Feb 18:09
0c27063
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Bump HCA CLI version for upload service updates.

v0.58.1

05 Dec 21:02
8f78731
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  • Bump the version of metadata-api to release/1.0b20 to avoid unnecessary connection discards.

v0.58.0

21 Nov 18:26
a6f9a21
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  • Determine Optimus chemistry from bundle metadata

v0.57.0

08 Oct 20:16
5f23845
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  • Add format_map into the code instead of passing in a copy of the file stored in gcloud
  • Update reference paths to use a production gcloud bucket
  • Add SmartSeq2 mouse reference files
  • Remove adapter pipelines into a separate repo
  • Update file format mapping

v0.56.6

09 Sep 19:01
b1c859e
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fixed bug in passing deployment to dss_client

v0.56.5

09 Sep 17:18
7bb9ad4
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fix to handle bundles missing lane index

v0.56.4

02 Sep 20:57
1202e87
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  • Fix getting metadata for bundles in the production data store

v0.56.3

19 Aug 22:39
8ee0184
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  • Remove data file checkout when only retrieving bundle metadata

v0.56.2

01 Aug 16:14
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  • Remove max_retries parameter from adapter WDLs so that it can be set by the workflow options file

v0.56.1

30 Jul 14:53
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  • Increase the number of maxRetries for Optimus workflows