challenge 2 3a 3b and sample data for 3b

docs/challenges/automation/zne/automated_zne_challenge2.py

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+from collections import deque
+import itertools
+import json
+import numpy as np
+import os
+import seaborn as sns
+import matplotlib.pyplot as plt
+
+from qiskit.quantum_info import SparsePauliOp
+from qiskit_ibm_runtime import Batch, EstimatorV2 as Estimator
+from qiskit_ibm_runtime.fake_provider import FakeSherbrooke
+from qiskit.transpiler.preset_passmanagers import generate_preset_pass_manager
+from qiskit_aer import AerSimulator
+from qiskit_ibm_runtime import RuntimeEncoder, RuntimeDecoder
+from datetime import datetime, timezone
+
+from circuit import ExampleCircuit
+
+def create_logical_circuit(num_qubits, depth, seed=0):
+    logical_circuit = ExampleCircuit(q, d // 2)  # Halved depth
+
+    # Compute-uncompute construct (doubles the depth)
+    inverse = logical_circuit.inverse()
+    logical_circuit.barrier()
+    logical_circuit.compose(inverse, inplace=True)
+
+    # Parameter values
+    rng = np.random.default_rng(seed=0)
+    parameter_values = rng.uniform(-np.pi, np.pi, size=logical_circuit.num_parameters)
+    parameter_values[0] = 0.3  # Fix interaction strength (specific to MBL circuit)
+    logical_circuit.assign_parameters(parameter_values, inplace=True)
+
+    return logical_circuit, parameter_values
+
+def create_wt2_logical_operator(num_qubits):
+    wt2 = deque(["I"] * (num_qubits - 2) + ["Z", "Z"])
+    logical_observables = []
+
+    coeff = 1/num_qubits
+    for _ in range(num_qubits):
+        wt2_term = "".join(literal for literal in wt2)
+        logical_observables.append((wt2_term, coeff))
+        wt2.rotate(-1)
+
+    return SparsePauliOp.from_list(logical_observables)
+
+def heatmap_plotter(
+        rel_err,
+        widths,
+        depths,
+        filename,
+        title,
+        directory,
+        xlabel="2-qubit depth",
+        ylabel="Number of qubits",
+):
+    plt.rcParams.update({"text.usetex": True, "font.family": "Helvetica"})
+    nrows = len(widths)
+    ncols = len(depths)
+
+    ax = sns.heatmap(rel_err, annot=True, cbar=False, vmin=0, vmax=100, cmap="binary", fmt=".0f")
+    # Drawing the frame
+    ax.axhline(y=0, color='k', linewidth=2) 
+
+    ax.axhline(y=nrows, color='k', linewidth=2) 
+
+    ax.axvline(x=0, color='k', linewidth = 2) 
+
+    ax.axvline(x=ncols, color='k', linewidth=2) 
+
+    xticks = np.array(list(range(ncols))) + 0.5
+    ax.set_xticks(ticks=xticks)
+    ax.set_xticklabels(labels=depths)
+
+    yticks = np.array(list(range(nrows))) + 0.5
+    ax.set_yticks(ticks=yticks)
+    ax.set_yticklabels(labels=widths[::-1])
+
+    ax.set_title(title)
+    ax.set_xlabel(xlabel)
+    ax.set_ylabel(ylabel)
+
+    # plt.show()
+
+    plt.savefig(
+        f"{directory}/{filename}",
+        bbox_inches="tight",
+        dpi=200,
+    )
+
+    plt.close()
+
+if __name__ == "__main__":
+    num_qubits = [4, 8, 16, 32, 64]
+    depths = [4, 8, 16, 32, 64]
+    extrapolators = ["exponential", "polynomial_degree_2", "linear", ("exponential", "linear")]
+    # backend = FakeSherbrooke()
+    # backend = AerSimulator.from_backend(backend)
+    backend = AerSimulator(method="matrix_product_state")
+
+    # create all circuits and observables
+    logical_circuits = []
+    logical_observables = []
+    circuit_parameters = []
+    for q in num_qubits:
+        for d in depths:
+            logical_circuit, parameter_values = create_logical_circuit(num_qubits=q, depth=d, seed=0)
+            logical_circuits.append(logical_circuit)
+            circuit_parameters.append(parameter_values.tolist())
+
+            logical_observable = create_wt2_logical_operator(num_qubits=q)
+            logical_observables.append(logical_observable)
+
+    # optimize circuit and observables
+    pm = generate_preset_pass_manager(optimization_level=3, backend=backend)
+    physical_circuits = pm.run(logical_circuits)
+
+    physical_observables = [
+        logical_observables[idx].apply_layout(layout=physical_circuits[idx].layout)
+        for idx in range(len(logical_observables))
+    ]
+
+    pubs = list(zip(physical_circuits, physical_observables))
+
+    timestamp = datetime.now(timezone.utc)
+    with Batch(backend=backend) as batch:
+        estimator = Estimator(mode=batch)
+        options = estimator.options
+        options.default_shots = 1000
+        options.optimization_level = 0
+        options.resilience_level = 0
+        options.resilience.zne_mitigation = True  # Activate ZNE error mitigation only
+
+        jobs = {}
+        for extrapolator in extrapolators:
+            options.resilience.zne.extrapolator = extrapolator
+            job = estimator.run(pubs)
+            jobs[str(extrapolator)] = job
+            print(f"  - {job.job_id()} ({extrapolator})")
+
+
+    results = {}
+    tmp = list(itertools.product(num_qubits, depths))
+    expvals_all = {str(extrapolator): np.empty(len(tmp)) for extrapolator in extrapolators}
+    for idx, (qubit, depth) in enumerate(tmp):
+        label = f"pub_{idx}"
+        results[label] = {}
+        results[label]["num_qubits"] = qubit
+        results[label]["depth"] = depth
+
+        # physical circuit is encoded using `RuntimeEncoder`. Use `RuntimeDecoder` to decode
+        encoded_physical_circuit = RuntimeEncoder().encode(physical_circuits[idx])
+        results[label]["physical_circuit"] = encoded_physical_circuit
+
+        obs = physical_observables[idx]
+        paulis = obs.paulis.to_labels()
+        coeffs = [str(coeff) for coeff in obs.coeffs]
+        results[label]["physical_observable"] = {
+            "paulis": paulis,
+            "coeffs": coeffs
+        }
+
+        # layout
+        layout = physical_circuits[idx].layout
+        final_layout = None if layout is None else layout.final_index_layout(filter_ancillas=True)
+        results[label]["final_qubit_layout"] = final_layout
+        results[label]["circuit_parameters"] = circuit_parameters[idx]
+
+        results[label]["expvals"] = {}
+        results[label]["job_ids"] = {}
+
+        for extrapolator in extrapolators:
+            extrapolator = str(extrapolator)
+            job = jobs[extrapolator]
+
+            primtive_results = job.result()
+            results[label]["job_ids"][extrapolator] = job.job_id()
+
+            pub_result = primtive_results[idx]
+            evs = pub_result.data.evs.tolist()
+            expvals_all[extrapolator][idx] = evs
+
+            results[label]["expvals"][extrapolator] = evs
+
+    all_data = {
+        "num_qubits_list": num_qubits,
+        "depths": depths,
+        "extrapolators": extrapolators,
+        "batch_id": batch.session_id,
+        "job_ids": [job.job_id() for job in jobs.values()],
+        "backend_name": backend.name,
+        "timestamp": timestamp.isoformat(),
+        "results": results
+    }
+
+
+    name_signature = f"challenge_2_{timestamp.strftime('%Y_%m_%d_%H_%M_%S_%f')}"
+    name_signature = "2"
+    if not os.path.exists(name_signature):
+        os.mkdir(name_signature)
+
+    with open(f"{name_signature}/data_{name_signature}.json", "w") as jf:
+        json.dump(all_data, jf, indent=2, sort_keys=False)
+
+    # plot heatmaps
+    for extrapolator in extrapolators:
+        extrapolator_str = str(extrapolator)
+
+        evs = np.flipud(
+            expvals_all[extrapolator_str].reshape((len(num_qubits), len(depths)))
+        )
+        rel_err = 100 * (1 - evs)
+
+        if isinstance(extrapolator, str):
+            extrapolator = [extrapolator]
+
+        heatmap_plotter(
+            rel_err,
+            widths=num_qubits,
+            depths=depths,
+            filename=f"rel_err_{name_signature}_{'_'.join(extrapolator)}.png",
+            title=r'Error (\%): ' + r'$\overline{\langle{Z_{q}}\rangle}$' + f' {extrapolator}',
+            directory=name_signature,
+            xlabel="2-qubit depth",
+            ylabel="Number of qubits",
+        )