T154 heterogeneous tissue #499
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| # This workflow will install Python dependencies, run unit_tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: SIMPA tests | |
| on: | |
| # run SIMPA tests on pushes to the main or develop branch | |
| push: | |
| branches: [ main, develop ] | |
| # and on all pull requests to the main or develop branch | |
| pull_request: | |
| branches: [ main, develop ] | |
| # as well as upon manual triggers through the 'Actions' tab of the GitHub UI | |
| workflow_dispatch: | |
| # Additionally, run Friday morning 6AM, so that we can react quickly if things break | |
| schedule: | |
| - cron: "0 5 * * 5" | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| os: [ubuntu-latest, macos-latest, windows-latest] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install simpa | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install . | |
| - name: Testing | |
| run: | | |
| python simpa_tests/do_coverage.py | |
| coverage xml |