updated configs

INCATools · Sep 24, 2019 · 9d3387b · 9d3387b
1 parent faf9ff3
commit 9d3387b
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Showing 14 changed files with 15 additions and 1 deletion.
diff --git a/configs/clo-odk.yaml b/configs/clo-odk.yaml
@@ -15,6 +15,7 @@ import_group:
     - id: uberon 
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: doid
     - id: pato
     - id: cl

diff --git a/configs/dpo-odk.yaml b/configs/dpo-odk.yaml
@@ -30,6 +30,7 @@ import_group:
     - id: go
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: pato
 robot_java_args: '-Xmx8G'
 allow_equivalents: all

diff --git a/configs/ecocore-odk.yaml b/configs/ecocore-odk.yaml
@@ -16,6 +16,7 @@ import_group:
     - id: uberon 
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: envo
     - id: pato
     - id: iao

diff --git a/configs/ecto-odk.yaml b/configs/ecto-odk.yaml
@@ -11,6 +11,7 @@ export_formats:
 import_group:
   products:
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: envo
     - id: exo
     - id: go
@@ -31,4 +32,4 @@ components:
   products:
     - filename: ecto-xrefs.owl
     - filename: bridge.owl
-allow_equivalents: none
+allow_equivalents: all
diff --git a/configs/fbcv-odk.yaml b/configs/fbcv-odk.yaml
@@ -20,6 +20,7 @@ import_group:
   products:
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
 edit_format: obo
 robot_java_args: '-Xmx8G'
 allow_equivalents: asserted-only

diff --git a/configs/fypo-odk.yaml b/configs/fypo-odk.yaml
@@ -20,6 +20,7 @@ import_group:
     - id: ro
     - id: iao
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: go
     - id: cl
     - id: pato

diff --git a/configs/hp-odk.yaml b/configs/hp-odk.yaml
@@ -26,6 +26,7 @@ import_group:
     - id: uberon 
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: hsapdv
     - id: pato
     - id: cl

diff --git a/configs/mgpo-odk.yaml b/configs/mgpo-odk.yaml
@@ -23,6 +23,7 @@ import_group:
     - id: uberon
     - id: pato
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: pr
 pattern_pipelines_group:
   products:

diff --git a/configs/mo-odk.yaml b/configs/mo-odk.yaml
@@ -23,6 +23,7 @@ import_group:
     - id: stato
     - id: bfo
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: hsapdv
     - id: cl
       mirror_from: http://purl.obolibrary.org/obo/cl/cl-base.owl

diff --git a/configs/mp-odk.yaml b/configs/mp-odk.yaml
@@ -30,6 +30,7 @@ import_group:
     - id: uberon 
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: pato
     - id: cl
       mirror_from: http://purl.obolibrary.org/obo/cl/cl-base.owl

diff --git a/configs/nbo-odk.yaml b/configs/nbo-odk.yaml
@@ -13,5 +13,6 @@ import_group:
     - id: uberon 
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: pato
 robot_java_args: '-Xmx8G'
diff --git a/configs/pato-odk.yaml b/configs/pato-odk.yaml
@@ -17,6 +17,7 @@ import_group:
   products:
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: go
     - id: pco
     - id: uberon

diff --git a/configs/wbphenotype-odk.yaml b/configs/wbphenotype-odk.yaml
@@ -24,6 +24,7 @@ import_group:
     - id: wbls 
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: pato
     - id: cl
     - id: iao

diff --git a/configs/zp-odk.yaml b/configs/zp-odk.yaml
@@ -14,6 +14,7 @@ import_group:
     - id: uberon 
     - id: ro
     - id: chebi
+      mirror_from: http://purl.obolibrary.org/obo/chebi.owl.gz
     - id: bspo
     - id: pato
     - id: mpath