elephant v0.6.4 [workshop] (NeuralEnsemble#268)

INM-6 · Oct 31, 2019 · 5dfa042 · 5dfa042
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diff --git a/MANIFEST.in b/MANIFEST.in
@@ -7,6 +7,7 @@ include elephant/current_source_density_src/README.md
 include elephant/current_source_density_src/test_data.mat
 include elephant/neural_trajectory_src/README.md
 include elephant/spade_src/LICENCE
+include elephant/gpfa_src/INFO.md
 recursive-include elephant/spade_src *.so *.pyd
 include elephant/test/spike_extraction_test_data.txt
 recursive-include doc *

diff --git a/doc/reference/gpfa.rst b/doc/reference/gpfa.rst
@@ -0,0 +1,6 @@
+=========================================
+`GPFA` - Gaussian-process factor analysis
+=========================================
+
+.. automodule:: elephant.gpfa
+   :members:
diff --git a/doc/release_notes.rst b/doc/release_notes.rst
@@ -2,6 +2,38 @@
 Release Notes
 *************
 
+Elephant 0.6.4 release notes
+============================
+
+This release has been made for the "1st Elephant User Workshop" (https://www.humanbrainproject.eu/en/education/participatecollaborate/infrastructure-events-trainings/1st-elephant-user-workshop-accelerate-structured-and-reproducibl).
+
+
+Main features
+-------------
+* neo v0.8.0 compatible
+
+
+New modules
+-----------
+* GPFA - Gaussian-process factor analysis - dimensionality reduction method for neural trajectory visualization (https://github.com/NeuralEnsemble/elephant/pull/233). _Note: the API could change in the future._
+
+
+Buf fixes
+---------
+* [signal processing] Keep `array_annotations` in the output of signal processing functions (https://github.com/NeuralEnsemble/elephant/pull/258).
+* [SPADE] Fixed the calculation of the duration of a pattern in the output (https://github.com/NeuralEnsemble/elephant/pull/254).
+* [statistics] Fixed automatic kernel selection yields incorrect values (https://github.com/NeuralEnsemble/elephant/pull/246).
+
+
+Improvements
+------------
+* Vectorized `spike_time_tiling_coefficient()` function - got rid of a double for-loop (https://github.com/NeuralEnsemble/elephant/pull/244)
+* Reduced the number of warnings during the tests (https://github.com/NeuralEnsemble/elephant/pull/238).
+* Removed unused debug code in `spade/fast_fca.py` (https://github.com/NeuralEnsemble/elephant/pull/249).
+* Improved doc string of `covariance()` and `corrcoef()` (https://github.com/NeuralEnsemble/elephant/pull/260).
+
+
+
 Elephant 0.6.3 release notes
 ============================
 July 22nd 2019

diff --git a/elephant/VERSION b/elephant/VERSION
@@ -1 +1 @@
-0.6.3
+0.6.4