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libs
EstimateDSMeasures.m
LTDB2CTC.m
LTDBCheck.m
LTDBExampleQuerym.m
LTDBReadImages.m
LTDBReadTracks.m
README.md
XTLTDBImportTracks.m
doExportTracks.m

README.md

Leukocyte Tracking Database

This repository will contain additional scripts to facilitate the usage of LTDB if and when it is published at the journal.

  • LTDBReadTracks.m - Reads tracks and dataset measures from track CSV files
  • LTDBReadImages.m - Reads TIFF sequences in a 4D data structure
  • LTDBExampleQuery.m - Example query for the LTDB SQL database
  • LTDB2CTC.m - Converts tracks in the format used by the Cell Tracking Challenge
  • LTDBCheck.m - Used to check for common tracking errors
  • EstimateDSMeasures.m - Used to estimate SNR and other parameters
  • XTLTDBImportTracks.m - Imports tracks as spots in Imaris