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README.md

Leukocyte Tracking Database

This repository will contain additional scripts to facilitate the usage of LTDB if and when it is published at the journal.

  • LTDBReadTracks.m - Reads tracks and dataset measures from track CSV files
  • LTDBReadImages.m - Reads TIFF sequences in a 4D data structure
  • LTDBExampleQuery.m - Example query for the LTDB SQL database
  • LTDB2CTC.m - Converts tracks in the format used by the Cell Tracking Challenge
  • LTDBCheck.m - Used to check for common tracking errors
  • EstimateDSMeasures.m - Used to estimate SNR and other parameters
  • XTLTDBImportTracks.m - Imports tracks as spots in Imaris

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