GitHub - IRIG-BCI-IMAC/COL7A1-project: Code added to the paper on COL7A1 as prognostic biomarker in ccRCC

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Code added to the paper on COL7A1 as prognostic biomarker in ccRCC

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Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
1_functions		1_functions
.gitignore		.gitignore
1_Braun_data_processing.R		1_Braun_data_processing.R
1_EMTAB1980_data_processing.R		1_EMTAB1980_data_processing.R
1_GSE167093_data_processing.R		1_GSE167093_data_processing.R
1_TCGA_data_processing.R		1_TCGA_data_processing.R
2_Table_2_TCGA_table_univariable_Cox_model.R		2_Table_2_TCGA_table_univariable_Cox_model.R
3_Figure_1_SATO_KM_curve.R		3_Figure_1_SATO_KM_curve.R
3_Figure_1_TCGA_KM_curves.R		3_Figure_1_TCGA_KM_curves.R
4_Figure_2_TCGA_KM_per_stage.R		4_Figure_2_TCGA_KM_per_stage.R
5_Suplementary_figure_2_Braun_KM_per_stage.R		5_Suplementary_figure_2_Braun_KM_per_stage.R
5_Suplementary_figure_2_EMTAB1980_KM_per_stage.R		5_Suplementary_figure_2_EMTAB1980_KM_per_stage.R
6_Supplementary_figure_3_TCGA_KM_per_grade.R		6_Supplementary_figure_3_TCGA_KM_per_grade.R
7_Table_3_TCGA_multivariable_Cox_and_anova.R		7_Table_3_TCGA_multivariable_Cox_and_anova.R
8_Figure_3_GSEA_based_on_Braun.R		8_Figure_3_GSEA_based_on_Braun.R
8_Figure_3_GSEA_based_on_EMTAB1980.R		8_Figure_3_GSEA_based_on_EMTAB1980.R
8_Figure_3_GSEA_based_on_GSE167093.R		8_Figure_3_GSEA_based_on_GSE167093.R
8_Figure_3_GSEA_based_on_TCGA.R		8_Figure_3_GSEA_based_on_TCGA.R
8_Figure_3_GSEA_plots.R		8_Figure_3_GSEA_plots.R
8_Figure_3_GSEA_plots_on_MT.R		8_Figure_3_GSEA_plots_on_MT.R
9_Supplementary_figure_4_Correlation_COL7A1_and_prolif_e2m.R		9_Supplementary_figure_4_Correlation_COL7A1_and_prolif_e2m.R
9_Supplementary_figure_5_Braun_MT_COL7A1_correlation.R		9_Supplementary_figure_5_Braun_MT_COL7A1_correlation.R
9_Supplementary_figure_5_TCGA_MT_COL7A1_correlation.R		9_Supplementary_figure_5_TCGA_MT_COL7A1_correlation.R