Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Deduplicate multiple fragments #22

Open
gblanke02 opened this issue May 22, 2024 · 2 comments
Open

Deduplicate multiple fragments #22

gblanke02 opened this issue May 22, 2024 · 2 comments
Assignees

Comments

@gblanke02
Copy link
Contributor

If a molecule consists out of multiple fragments but no other fragement the InChI should only be calculated based on 1 fragment. In case you multiple identical fragments but any other fragment in addition the InChI must be calculated as is (version 1.07).

Example: molecule consisting out of 2 ethanol fragments: CH3-CH2-OH . CH3-CH2-OH. The InChI is:
InChI=1S/2C2H6O/c21-2-3/h23H,2H2,1H3
Uli Schatzschneider proposed to deduplicate the InChI to one ethanol unit with InChI=1S/C2H6O/c1-2-3/h3H,2H2,1H3.

Note: This rule must not be applied in case the molecule consists out of different fragment types e.g. methanol + ethanol + ethanol

@gblanke02 gblanke02 self-assigned this May 22, 2024
@JanCBrammer
Copy link
Collaborator

JanCBrammer commented May 23, 2024

If a molecule consists out of multiple fragments but no other fragement

This could be re-phrased as "If a molecule consists exclusively of identical fragments"?

@gblanke02
Copy link
Contributor Author

gblanke02 commented May 23, 2024 via email

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants