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setup.py
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setup.py
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from setuptools import setup
def readme():
with open('README.md') as f:
return f.read()
setup(name='gauchian',
version='1.0',
description='WGS-based GBA variant caller',
long_description=readme(),
classifiers=[],
keywords='GBA',
url='https://github.com/illumina/Gauchian',
author='Xiao Chen',
author_email='xchen2@illumina.com',
license='GPLv3',
packages=['gauchian', 'gauchian.caller', 'gauchian.depth_calling'],
package_data={'gauchian': ['data/*']},
install_requires=['pysam', 'numpy', 'scipy', 'statsmodels'],
setup_requires=['pytest-runner'],
tests_require=['pytest'],
entry_points={
'console_scripts': [
'gauchian=gauchian.gauchian:run'
]
},
include_package_data=True,
zip_safe=False)