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bump version no and submit to CRAN
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IndrajeetPatil committed Jun 20, 2020
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4 changes: 2 additions & 2 deletions CRAN-RELEASE
@@ -1,2 +1,2 @@
This package was submitted to CRAN on 2020-06-19.
Once it is accepted, delete this file and tag the release (commit b3da19b01d).
This package was submitted to CRAN on 2020-06-20.
Once it is accepted, delete this file and tag the release (commit 60510fae04).
2 changes: 1 addition & 1 deletion DESCRIPTION
@@ -1,7 +1,7 @@
Type: Package
Package: pairwiseComparisons
Title: Multiple Pairwise Comparison Tests
Version: 1.1.0
Version: 1.1.1
Authors@R:
person(given = "Indrajeet",
family = "Patil",
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2 changes: 1 addition & 1 deletion NEWS.md
@@ -1,4 +1,4 @@
# pairwiseComparisons 1.1.0
# pairwiseComparisons 1.1.1

- For repeated measures datasets with `NA`s present, the Bayes Factor values
were incorrect. This is fixed.
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2 changes: 1 addition & 1 deletion R/helpers.R
Expand Up @@ -26,4 +26,4 @@ p_adjust_column_adder <- function(df, p.adjust.method) {
df %>%
dplyr::mutate(p.value = stats::p.adjust(p = p.value, method = p.adjust.method)) %>%
signif_column(data = ., p = p.value)
}
}
2 changes: 1 addition & 1 deletion README.Rmd
Expand Up @@ -23,7 +23,7 @@ knitr::opts_chunk$set(

Package | Status | Usage | GitHub | References
----------------- | ----------------- | ----------------- | ----------------- | -----------------
[![CRAN_Release_Badge](http://www.r-pkg.org/badges/version-ago/pairwiseComparisons)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Travis Build Status](https://travis-ci.org/IndrajeetPatil/pairwiseComparisons.svg?branch=master)](https://travis-ci.org/IndrajeetPatil/pairwiseComparisons) | [![Daily downloads badge](https://cranlogs.r-pkg.org/badges/last-day/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![GitHub version](https://img.shields.io/badge/GitHub-1.1.0-orange.svg?style=flat-square)](https://github.com/IndrajeetPatil/pairwiseComparisons/) | [![Website](https://img.shields.io/badge/website-pairwiseComparisons-orange.svg?colorB=E91E63)](https://indrajeetpatil.github.io/pairwiseComparisons/)
[![CRAN_Release_Badge](http://www.r-pkg.org/badges/version-ago/pairwiseComparisons)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Travis Build Status](https://travis-ci.org/IndrajeetPatil/pairwiseComparisons.svg?branch=master)](https://travis-ci.org/IndrajeetPatil/pairwiseComparisons) | [![Daily downloads badge](https://cranlogs.r-pkg.org/badges/last-day/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![GitHub version](https://img.shields.io/badge/GitHub-1.1.1-orange.svg?style=flat-square)](https://github.com/IndrajeetPatil/pairwiseComparisons/) | [![Website](https://img.shields.io/badge/website-pairwiseComparisons-orange.svg?colorB=E91E63)](https://indrajeetpatil.github.io/pairwiseComparisons/)
[![CRAN Checks](https://cranchecks.info/badges/summary/pairwiseComparisons)](https://cran.r-project.org/web/checks/check_results_pairwiseComparisons.html) | [![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/IndrajeetPatil/pairwiseComparisons?branch=master&svg=true)](https://ci.appveyor.com/project/IndrajeetPatil/pairwiseComparisons) | [![Weekly downloads badge](https://cranlogs.r-pkg.org/badges/last-week/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Forks](https://img.shields.io/badge/forks-`r itdepends:::get_github_info("pairwiseComparisons")$forks[[1]]`-blue.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/) | [![Rdoc](https://www.rdocumentation.org/badges/version/pairwiseComparisons)](https://www.rdocumentation.org/packages/pairwiseComparisons)
[![minimal R version](https://img.shields.io/badge/R%3E%3D-3.6.0-6666ff.svg)](https://cran.r-project.org/) | [![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/) | [![Monthly downloads badge](https://cranlogs.r-pkg.org/badges/last-month/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Github Issues](https://img.shields.io/badge/issues-`r itdepends:::get_github_info("pairwiseComparisons")$open_issues[[1]]`-red.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/issues) | [![vignettes](https://img.shields.io/badge/vignettes-1.0.0-orange.svg?colorB=FF5722)](https://github.com/IndrajeetPatil/pairwiseComparisons/blob/master/README.md)
[![GitHub code size in bytes](https://img.shields.io/github/languages/code-size/IndrajeetPatil/pairwiseComparisons.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons) | [![Coverage Status](https://coveralls.io/repos/github/IndrajeetPatil/pairwiseComparisons/badge.svg?branch=master)](https://coveralls.io/github/IndrajeetPatil/pairwiseComparisons?branch=master) | [![Total downloads badge](https://cranlogs.r-pkg.org/badges/grand-total/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Github Stars](https://img.shields.io/github/stars/IndrajeetPatil/pairwiseComparisons.svg?style=social&label=Github)](https://github.com/IndrajeetPatil/pairwiseComparisons) | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.2074621.svg)](https://doi.org/10.5281/zenodo.2074621)
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4 changes: 2 additions & 2 deletions README.md
Expand Up @@ -5,11 +5,11 @@

| Package | Status | Usage | GitHub | References |
| ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| [![CRAN\_Release\_Badge](http://www.r-pkg.org/badges/version-ago/pairwiseComparisons)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Travis Build Status](https://travis-ci.org/IndrajeetPatil/pairwiseComparisons.svg?branch=master)](https://travis-ci.org/IndrajeetPatil/pairwiseComparisons) | [![Daily downloads badge](https://cranlogs.r-pkg.org/badges/last-day/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![GitHub version](https://img.shields.io/badge/GitHub-1.1.0-orange.svg?style=flat-square)](https://github.com/IndrajeetPatil/pairwiseComparisons/) | [![Website](https://img.shields.io/badge/website-pairwiseComparisons-orange.svg?colorB=E91E63)](https://indrajeetpatil.github.io/pairwiseComparisons/) |
| [![CRAN\_Release\_Badge](http://www.r-pkg.org/badges/version-ago/pairwiseComparisons)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Travis Build Status](https://travis-ci.org/IndrajeetPatil/pairwiseComparisons.svg?branch=master)](https://travis-ci.org/IndrajeetPatil/pairwiseComparisons) | [![Daily downloads badge](https://cranlogs.r-pkg.org/badges/last-day/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![GitHub version](https://img.shields.io/badge/GitHub-1.1.1-orange.svg?style=flat-square)](https://github.com/IndrajeetPatil/pairwiseComparisons/) | [![Website](https://img.shields.io/badge/website-pairwiseComparisons-orange.svg?colorB=E91E63)](https://indrajeetpatil.github.io/pairwiseComparisons/) |
| [![CRAN Checks](https://cranchecks.info/badges/summary/pairwiseComparisons)](https://cran.r-project.org/web/checks/check_results_pairwiseComparisons.html) | [![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/IndrajeetPatil/pairwiseComparisons?branch=master&svg=true)](https://ci.appveyor.com/project/IndrajeetPatil/pairwiseComparisons) | [![Weekly downloads badge](https://cranlogs.r-pkg.org/badges/last-week/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Forks](https://img.shields.io/badge/forks-3-blue.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/) | [![Rdoc](https://www.rdocumentation.org/badges/version/pairwiseComparisons)](https://www.rdocumentation.org/packages/pairwiseComparisons) |
| [![minimal R version](https://img.shields.io/badge/R%3E%3D-3.6.0-6666ff.svg)](https://cran.r-project.org/) | [![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/) | [![Monthly downloads badge](https://cranlogs.r-pkg.org/badges/last-month/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Github Issues](https://img.shields.io/badge/issues-1-red.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/issues) | [![vignettes](https://img.shields.io/badge/vignettes-1.0.0-orange.svg?colorB=FF5722)](https://github.com/IndrajeetPatil/pairwiseComparisons/blob/master/README.md) |
| [![GitHub code size in bytes](https://img.shields.io/github/languages/code-size/IndrajeetPatil/pairwiseComparisons.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons) | [![Coverage Status](https://coveralls.io/repos/github/IndrajeetPatil/pairwiseComparisons/badge.svg?branch=master)](https://coveralls.io/github/IndrajeetPatil/pairwiseComparisons?branch=master) | [![Total downloads badge](https://cranlogs.r-pkg.org/badges/grand-total/pairwiseComparisons?color=blue)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![Github Stars](https://img.shields.io/github/stars/IndrajeetPatil/pairwiseComparisons.svg?style=social&label=Github)](https://github.com/IndrajeetPatil/pairwiseComparisons) | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.2074621.svg)](https://doi.org/10.5281/zenodo.2074621) |
| [![Licence](https://img.shields.io/badge/licence-GPL--3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.en.html) | [![Codecov test coverage](https://codecov.io/gh/IndrajeetPatil/pairwiseComparisons/branch/master/graph/badge.svg)](https://codecov.io/gh/IndrajeetPatil/pairwiseComparisons?branch=master) | [![Covrpage Summary](https://img.shields.io/badge/covrpage-Last_Build_2020_05_29-brightgreen.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/blob/master/tests/README.md) | [![Last-changedate](https://img.shields.io/badge/last%20change-2020--06--18-yellowgreen.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/commits/master) | [![GitHub last commit](https://img.shields.io/github/last-commit/IndrajeetPatil/pairwiseComparisons.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/commits/master) |
| [![Licence](https://img.shields.io/badge/licence-GPL--3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.en.html) | [![Codecov test coverage](https://codecov.io/gh/IndrajeetPatil/pairwiseComparisons/branch/master/graph/badge.svg)](https://codecov.io/gh/IndrajeetPatil/pairwiseComparisons?branch=master) | [![Covrpage Summary](https://img.shields.io/badge/covrpage-Last_Build_2020_05_29-brightgreen.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/blob/master/tests/README.md) | [![Last-changedate](https://img.shields.io/badge/last%20change-2020--06--20-yellowgreen.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/commits/master) | [![GitHub last commit](https://img.shields.io/github/last-commit/IndrajeetPatil/pairwiseComparisons.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons/commits/master) |
| [![status](https://tinyverse.netlify.com/badge/pairwiseComparisons)](https://CRAN.R-project.org/package=pairwiseComparisons) | [![R build status](https://github.com/IndrajeetPatil/pairwiseComparisons/workflows/R-CMD-check/badge.svg)](https://github.com/IndrajeetPatil/pairwiseComparisons) | [![Gitter chat](https://badges.gitter.im/gitterHQ/gitter.png)](https://gitter.im/pairwiseComparisons/community) | [![Project Status](http://www.repostatus.org/badges/latest/active.svg)](http://www.repostatus.org/#active) | [![contributions welcome](https://img.shields.io/badge/contributions-welcome-brightgreen.svg?style=flat)](https://github.com/IndrajeetPatil/pairwiseComparisons/issues) |

# Introduction <img src="man/figures/logo.png" align="right" width="240" />
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4 changes: 2 additions & 2 deletions codemeta.json
Expand Up @@ -14,7 +14,7 @@
],
"issueTracker": "\n https://github.com/IndrajeetPatil/pairwiseComparisons/issues",
"license": "https://spdx.org/licenses/GPL-3.0",
"version": "1.1.0",
"version": "1.1.1",
"programmingLanguage": {
"@type": "ComputerLanguage",
"name": "R",
Expand Down Expand Up @@ -278,5 +278,5 @@
"name": "Comprehensive R Archive Network (CRAN)",
"url": "https://cran.r-project.org"
},
"fileSize": "1485.799KB"
"fileSize": "1486.034KB"
}
5 changes: 2 additions & 3 deletions cran-comments.md
Expand Up @@ -7,6 +7,5 @@

0 errors | 0 warnings | 0 note

- Gets rid of `NOTE` produced in daily CRAN checks.

- Makes package compatible with new release of `ipmisc` and `tidyBF`.
- Fixed failing tests in CRAN checks due to new releases of `ipmisc` and
`tidyBF` packages.
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4 comments on commit 1410d86

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R/games_howell.R:53:28: warning: Avoid 1:NCOL(...) expressions, use seq_len.

statistics <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                           ^

R/games_howell.R:86:29: warning: Avoid 1:NCOL(...) expressions, use seq_len.

conf.high <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                            ^

R/games_howell.R:95:28: warning: Avoid 1:NCOL(...) expressions, use seq_len.

conf.low <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                           ^

R/games_howell.R:108:5: warning: local variable ‘stats’ assigned but may not be used

stats <- list(group1, group2, mean.diff, se, t, df, p, conf.high, conf.low)
    ^~~~~

R/pairwise_comparisons.R:482:3: warning: local variable ‘adjust_text’ assigned but may not be used

adjust_text <- ifelse(p.adjust.method == "none", "unadjusted", "adjusted")
  ^~~~~~~~~~~

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R/games_howell.R:53:28: warning: Avoid 1:NCOL(...) expressions, use seq_len.

statistics <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                           ^

R/games_howell.R:86:29: warning: Avoid 1:NCOL(...) expressions, use seq_len.

conf.high <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                            ^

R/games_howell.R:95:28: warning: Avoid 1:NCOL(...) expressions, use seq_len.

conf.low <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                           ^

R/games_howell.R:108:5: warning: local variable ‘stats’ assigned but may not be used

stats <- list(group1, group2, mean.diff, se, t, df, p, conf.high, conf.low)
    ^~~~~

R/pairwise_comparisons.R:482:3: warning: local variable ‘adjust_text’ assigned but may not be used

adjust_text <- ifelse(p.adjust.method == "none", "unadjusted", "adjusted")
  ^~~~~~~~~~~

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R/games_howell.R:53:28: warning: Avoid 1:NCOL(...) expressions, use seq_len.

statistics <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                           ^

R/games_howell.R:86:29: warning: Avoid 1:NCOL(...) expressions, use seq_len.

conf.high <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                            ^

R/games_howell.R:95:28: warning: Avoid 1:NCOL(...) expressions, use seq_len.

conf.low <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                           ^

R/games_howell.R:108:5: warning: local variable ‘stats’ assigned but may not be used

stats <- list(group1, group2, mean.diff, se, t, df, p, conf.high, conf.low)
    ^~~~~

R/pairwise_comparisons.R:482:3: warning: local variable ‘adjust_text’ assigned but may not be used

adjust_text <- ifelse(p.adjust.method == "none", "unadjusted", "adjusted")
  ^~~~~~~~~~~

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R/games_howell.R:53:28: warning: Avoid 1:NCOL(...) expressions, use seq_len.

statistics <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                           ^

R/games_howell.R:86:29: warning: Avoid 1:NCOL(...) expressions, use seq_len.

conf.high <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                            ^

R/games_howell.R:95:28: warning: Avoid 1:NCOL(...) expressions, use seq_len.

conf.low <- lapply(X = 1:NCOL(combs), FUN = function(x) {
                           ^

R/games_howell.R:108:5: warning: local variable ‘stats’ assigned but may not be used

stats <- list(group1, group2, mean.diff, se, t, df, p, conf.high, conf.low)
    ^~~~~

R/pairwise_comparisons.R:482:3: warning: local variable ‘adjust_text’ assigned but may not be used

adjust_text <- ifelse(p.adjust.method == "none", "unadjusted", "adjusted")
  ^~~~~~~~~~~

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