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Frame Averaging Energy Reduction Bugfix #205

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melo-gonzo
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Currently, when frame averaging is uses, the predicted energy values are stored in a list because each frame will have an associated prediction. When reduced, this would collapse all of the predictions into a single scalar value, instead of a scalar value per sample in a batch. This PR addresses this issue by concatenating all predicted energy outputs prior to the reduction.

This PR also adds tests for FAENet for this specific bug as well as general forward pass checks for the applicable datasets.

This PR adds a check to keys in a batch, and includes natoms if not present, inside of the read_batch of FAENet itself.

@laserkelvin
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This doesn't seem to have the stuff from #204 - can you rebase?

matsciml/models/pyg/faenet/faenet.py Show resolved Hide resolved
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@laserkelvin laserkelvin merged commit 4f6bdcb into IntelLabs:main May 6, 2024
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@melo-gonzo melo-gonzo deleted the faenet-bugfix-energy-reduction branch June 11, 2024 16:57
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2 participants