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Add volcanic scaling factor #291

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Mar 21, 2019
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1 change: 1 addition & 0 deletions NAMESPACE
Original file line number Diff line number Diff line change
Expand Up @@ -129,6 +129,7 @@ export(TID)
export(TT)
export(TU)
export(TWI)
export(VOLCANIC_SCALE)
export(VOLCANIC_SO2)
export(Y2000_SO2)
export(enddate)
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8 changes: 7 additions & 1 deletion R/RcppExports.R
Original file line number Diff line number Diff line change
Expand Up @@ -736,12 +736,18 @@ ECS <- function() {
.Call('_hector_ECS', PACKAGE = 'hector')
}

#' @describeIn parameters Aerosol scaling factor (\code{"(unitless)"})
#' @describeIn parameters Aerosol forcing scaling factor (\code{"(unitless)"})
#' @export
AERO_SCALE <- function() {
.Call('_hector_AERO_SCALE', PACKAGE = 'hector')
}

#' @describeIn parameters Volcanic forcing scaling factor (\code{"(unitless)"})
#' @export
VOLCANIC_SCALE <- function() {
.Call('_hector_VOLCANIC_SCALE', PACKAGE = 'hector')
}

#' @describeIn temperature Global mean temperature
#' @export
GLOBAL_TEMP <- function() {
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Binary file modified R/sysdata.rda
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4 changes: 2 additions & 2 deletions data-raw/units-data.R
Original file line number Diff line number Diff line change
@@ -1,14 +1,14 @@
library(hector)

hvars <- c(ECS(), PREINDUSTRIAL_CO2(), Q10_RH(), BETA(), AERO_SCALE(), DIFFUSIVITY(),
hvars <- c(ECS(), PREINDUSTRIAL_CO2(), Q10_RH(), BETA(), AERO_SCALE(), VOLCANIC_SCALE(), DIFFUSIVITY(),
FFI_EMISSIONS(), LUC_EMISSIONS(),
EMISSIONS_BC(), EMISSIONS_N2O(), EMISSIONS_NOX(), EMISSIONS_CO(),
EMISSIONS_NMVOC(), EMISSIONS_OC(),
EMISSIONS_CH4(), PREINDUSTRIAL_CH4(), NATURAL_CH4(), LIFETIME_SOIL(), LIFETIME_STRAT(),
EMISSIONS_SO2(), VOLCANIC_SO2())


hunits <- c('degC', 'ppmv CO2', '(unitless)', '(unitless)', '(unitless)', 'cm2/s',
hunits <- c('degC', 'ppmv CO2', '(unitless)', '(unitless)', '(unitless)', '(unitless)', 'cm2/s',
'Pg C/yr', 'Pg C/yr',
'Tg', 'Tg N', 'Tg N', 'Tg CO',
'Tg NMVOC', 'Tg',
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1 change: 1 addition & 0 deletions inst/include/component_data.hpp
Original file line number Diff line number Diff line change
Expand Up @@ -252,6 +252,7 @@
// temperature component
#define D_DIFFUSIVITY "diff"
#define D_AERO_SCALE "alpha"
#define D_VOLCANIC_SCALE "volscl"
#define D_FLUX_MIXED "flux_mixed"
#define D_FLUX_INTERIOR "flux_interior"
#define D_HEAT_FLUX "heatflux"
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1 change: 1 addition & 0 deletions inst/include/temperature_component.hpp
Original file line number Diff line number Diff line change
Expand Up @@ -134,6 +134,7 @@ class TemperatureComponent : public IModelComponent {
unitval S; //!< climate sensitivity for 2xCO2, deg C
unitval diff; //!< ocean heat diffusivity, cm2/s
unitval alpha; //!< aerosol forcing factor, unitless
unitval volscl; //!< volcanic forcing scaling factor, unitless

// Model outputs
unitval tgav; //!< global temperature delta, deg C
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1 change: 1 addition & 0 deletions inst/input/hector-gcam.ini
Original file line number Diff line number Diff line change
Expand Up @@ -139,6 +139,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
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Perhaps both scaling factors' comments should note centered around 1, i.e. 1.0 = no scaling?

; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp26.ini
Original file line number Diff line number Diff line change
Expand Up @@ -158,6 +158,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp26_constrained.ini
Original file line number Diff line number Diff line change
Expand Up @@ -159,6 +159,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp26_histconstrain.ini
Original file line number Diff line number Diff line change
Expand Up @@ -160,6 +160,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp45.ini
Original file line number Diff line number Diff line change
Expand Up @@ -158,6 +158,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp45_constrained.ini
Original file line number Diff line number Diff line change
Expand Up @@ -159,6 +159,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp60.ini
Original file line number Diff line number Diff line change
Expand Up @@ -158,6 +158,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp60_constrained.ini
Original file line number Diff line number Diff line change
Expand Up @@ -159,6 +159,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp85.ini
Original file line number Diff line number Diff line change
Expand Up @@ -158,6 +158,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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1 change: 1 addition & 0 deletions inst/input/hector_rcp85_constrained.ini
Original file line number Diff line number Diff line change
Expand Up @@ -159,6 +159,7 @@ enabled=1
S=3.0 ; equilibrium climate sensitivity for 2xCO2, degC
diff=2.3 ; ocean heat diffusivity, cm2/s
alpha=1.0 ; scaling factor for aerosol forcing
volscl=1.0 ; scaling factor for volcanic forcing
; Optional global temperature constraint
; If supplied, the model will use these data, ignoring what it calculates
; tgav_constrain=csv:constraints/tgav_historical.csv
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7 changes: 6 additions & 1 deletion man/parameters.Rd

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11 changes: 11 additions & 0 deletions src/RcppExports.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -1235,6 +1235,16 @@ BEGIN_RCPP
return rcpp_result_gen;
END_RCPP
}
// VOLCANIC_SCALE
String VOLCANIC_SCALE();
RcppExport SEXP _hector_VOLCANIC_SCALE() {
BEGIN_RCPP
Rcpp::RObject rcpp_result_gen;
Rcpp::RNGScope rcpp_rngScope_gen;
rcpp_result_gen = Rcpp::wrap(VOLCANIC_SCALE());
return rcpp_result_gen;
END_RCPP
}
// GLOBAL_TEMP
String GLOBAL_TEMP();
RcppExport SEXP _hector_GLOBAL_TEMP() {
Expand Down Expand Up @@ -1507,6 +1517,7 @@ static const R_CallMethodDef CallEntries[] = {
{"_hector_VOLCANIC_SO2", (DL_FUNC) &_hector_VOLCANIC_SO2, 0},
{"_hector_ECS", (DL_FUNC) &_hector_ECS, 0},
{"_hector_AERO_SCALE", (DL_FUNC) &_hector_AERO_SCALE, 0},
{"_hector_VOLCANIC_SCALE", (DL_FUNC) &_hector_VOLCANIC_SCALE, 0},
{"_hector_GLOBAL_TEMP", (DL_FUNC) &_hector_GLOBAL_TEMP, 0},
{"_hector_GLOBAL_TEMPEQ", (DL_FUNC) &_hector_GLOBAL_TEMPEQ, 0},
{"_hector_DIFFUSIVITY", (DL_FUNC) &_hector_DIFFUSIVITY, 0},
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9 changes: 8 additions & 1 deletion src/rcpp_constants.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -936,13 +936,20 @@ String ECS() {
return D_ECS;
}

//' @describeIn parameters Aerosol scaling factor (\code{"(unitless)"})
//' @describeIn parameters Aerosol forcing scaling factor (\code{"(unitless)"})
//' @export
// [[Rcpp::export]]
String AERO_SCALE() {
return D_AERO_SCALE;
}

//' @describeIn parameters Volcanic forcing scaling factor (\code{"(unitless)"})
//' @export
// [[Rcpp::export]]
String VOLCANIC_SCALE() {
return D_VOLCANIC_SCALE;
}

//' @describeIn temperature Global mean temperature
//' @export
// [[Rcpp::export]]
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14 changes: 11 additions & 3 deletions src/temperature_component.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -92,6 +92,7 @@ void TemperatureComponent::init( Core* coreptr ) {
diff.set( 0.55, U_CM2_S ); // default ocean heat diffusivity, cm2/s. value is CDICE default (varname is kappa there).
S.set( 3.0, U_DEGC ); // default climate sensitivity, K (varname is t2co in CDICE).
alpha.set( 1.0, U_UNITLESS); // default aerosol scaling, unitless (similar to alpha in CDICE).
volscl.set(1.0, U_UNITLESS); // Default volcanic scaling, unitless (works the same way as alpha)

// Register the data we can provide
core->registerCapability( D_GLOBAL_TEMP, getComponentName() );
Expand All @@ -111,6 +112,7 @@ void TemperatureComponent::init( Core* coreptr ) {
core->registerInput(D_ECS, getComponentName());
core->registerInput(D_DIFFUSIVITY, getComponentName());
core->registerInput(D_AERO_SCALE, getComponentName());
core->registerInput(D_VOLCANIC_SCALE, getComponentName());
}

//------------------------------------------------------------------------------
Expand Down Expand Up @@ -151,6 +153,9 @@ void TemperatureComponent::setData( const string& varName,
} else if( varName == D_AERO_SCALE ) {
H_ASSERT( data.date == Core::undefinedIndex(), "date not allowed" );
alpha = data.getUnitval(U_UNITLESS);
} else if(varName == D_VOLCANIC_SCALE) {
H_ASSERT( data.date == Core::undefinedIndex(), "date not allowed" );
volscl = data.getUnitval(U_UNITLESS);
} else if( varName == D_TGAV_CONSTRAIN ) {
H_ASSERT( data.date != Core::undefinedIndex(), "date required" );
tgav_constrain.set(data.date, data.getUnitval(U_DEGC));
Expand Down Expand Up @@ -324,8 +329,11 @@ void TemperatureComponent::run( const double runToDate ) throw ( h_exception ) {
double aero_forcing =
double(core->sendMessage( M_GETDATA, D_RF_BC ).value( U_W_M2 )) + double(core->sendMessage( M_GETDATA, D_RF_OC).value( U_W_M2 )) +
double(core->sendMessage( M_GETDATA, D_RF_SO2d ).value( U_W_M2 )) + double(core->sendMessage( M_GETDATA, D_RF_SO2i ).value( U_W_M2 ));
double volcanic_forcing = double(core->sendMessage(M_GETDATA, D_RF_VOL));

forcing[tstep] = double(core->sendMessage( M_GETDATA, D_RF_TOTAL ).value( U_W_M2 )) - ( 1.0 - alpha ) * aero_forcing;
forcing[tstep] = double(core->sendMessage(M_GETDATA, D_RF_TOTAL).value(U_W_M2))
- (1.0 - alpha) * aero_forcing
- (1.0 - volscl) * volcanic_forcing;

// Initialize variables for time-stepping through the model
double DQ1 = 0.0;
Expand Down Expand Up @@ -441,8 +449,8 @@ unitval TemperatureComponent::getData( const std::string& varName,
returnval = heatflux;
} else if( varName == D_ECS ) {
returnval = S;
} else if(varName == D_AERO_SCALE) {
returnval = alpha;
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why did you delete the alpha here?

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It was a duplicate. Alpha is already processed on lines 434-435 (old numbering).

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ah, gotcha!

} else if(varName == D_VOLCANIC_SCALE) {
returnval = volscl;
} else {
H_THROW( "Caller is requesting unknown variable: " + varName );
}
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20 changes: 18 additions & 2 deletions tests/testthat/test_parameters.R
Original file line number Diff line number Diff line change
Expand Up @@ -102,8 +102,7 @@ test_that('Lowering diffusivity increases temperature', {
shutdown(hc)
})

test_that('Lowering aerosol scaling factor increases temperature',
{
test_that('Lowering aerosol forcing scaling factor increases temperature', {
hc <- newcore(file.path(inputdir, 'hector_rcp45.ini'), suppresslogging =
TRUE)
run(hc, 2100)
Expand All @@ -124,3 +123,20 @@ test_that('Lowering aerosol scaling factor increases temperature',
shutdown(hc)
})

test_that('Increasing volcanic forcing scaling factor increases the effect of volcanism', {
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👍

## Use the difference between 1960 temperature and 1965 temperature as a
## measure of the volcanic effect.
hc <- newcore(file.path(inputdir, 'hector_rcp45.ini'), suppresslogging=TRUE)
run(hc, 1971)
dates <- c(1960, 1965)
tbase <- fetchvars(hc, dates, GLOBAL_TEMP())
vsibase <- tbase$value[1] - tbase$value[2]

setvar(hc, NA, VOLCANIC_SCALE(), 1.5, getunits(VOLCANIC_SCALE()))
reset(hc)
run(hc, 1971)
tscl <- fetchvars(hc, dates, GLOBAL_TEMP())
vsiscl <- tscl$value[1] - tscl$value[2]

expect_gt(vsiscl, vsibase)
})