Jupyter Notebook 0 37

poretools

forked from arq5x/poretools

a toolkit for working with Oxford nanopore data

Updated Aug 31, 2016

pigz

forked from madler/pigz

A parallel implementation of gzip for modern multi-processor, multi-core machines.

Updated Jun 10, 2016

minoTour

forked from minoTour/minoTour

Real time data analysis tools for the minION sequencing platform.

Updated May 19, 2016

currennt

forked from nanoporetech/currennt

Modified fork of CURRENNT https://sourceforge.net/projects/currennt/

Updated Mar 14, 2016

Kmernator

An MPI Toolkit for large-scale genomic analysis

Updated Feb 29, 2016

Python 0 288

StarCluster

forked from jtriley/StarCluster

StarCluster is an open source cluster-computing toolkit for Amazon's Elastic Compute Cloud (EC2).

Updated Jan 22, 2016

Java 7 6

biopig

Updated Nov 10, 2015

klib

forked from attractivechaos/klib

A standalone and lightweight C library

Updated Aug 4, 2015

OxfordNanoporeData

For posting public data

Updated May 29, 2015

nanopolish

forked from jts/nanopolish

Signal-level algorithms for MinION data

Updated Apr 23, 2015

JavaScript 0 3

BioMart

forked from biomart/BioMart

Updated Mar 14, 2015

homebrew-jgi

Formulae for bioinformatics NERSC installs

Updated Mar 11, 2015

DASW

Double Affine Smith-Waterman on CPU

Updated Feb 15, 2015

megahit

forked from voutcn/megahit

MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

Updated Dec 18, 2014

bitarray

forked from ilanschnell/bitarray

efficient arrays of booleans for Python

Updated Jul 14, 2014

zlib

forked from madler/zlib

A massively spiffy yet delicately unobtrusive compression library.

Updated Apr 29, 2013