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Edit bibtex file in order to aovid R CMD notes. #132

Edit bibtex file in order to aovid R CMD notes.

Edit bibtex file in order to aovid R CMD notes. #132

Workflow file for this run

# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
on:
push:
branches:
- main
- master
pull_request:
branches:
- main
- master
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: windows-latest, r: 'release'}
- {os: macOS-latest, r: 'release'}
- {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
# - {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
env:
_R_REMOTES_NO_ERRORS_FROM_WARNINGS_: true
_R_CHECK_FORCE_SUGGESTS_: false
_R_CHECK_TIMINGS_: 10
_R_CHECK_CRAN_INCOMING_REMOTE_: false
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
CI: true
SDKROOT: /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
DISPLAY: ":99"
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-tinytex@v1
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
- uses: r-lib/actions/setup-pandoc@v1
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Install Linux dependencies
if: runner.os == 'Linux'
run: |
while read -r cmd
do
eval sudo $cmd
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
- name: Install mac OS dependencies
if: runner.os == 'macOS'
run: |
brew install --cask xquartz
- name: Install dependencies
run: |
install.packages('curl')
install.packages('devtools')
install.packages('spelling')
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
remotes::install_github('yihui/tinytex')
install.packages('tinytex')
tinytex::parse_install(text = "! LaTeX Error: File `pdfpages.sty' not found.")
tinytex::parse_install(text = "! LaTeX Error: File `ae.sty' not found.")
tinytex::parse_install(text = "! LaTeX Error: File `pdflscape.sty' not found.")
tinytex::parse_install(text = "! LaTeX Error: File `thumbpdf.sty' not found.")
tinytex::parse_install(text = "! LaTeX Error: File `subcaption.sty' not found.")
tinytex::parse_install(text = "! LaTeX Error: File `float.sty' not found.")
tinytex::parse_install(text = "! LaTeX Error: File `xcolor.sty' not found.")
shell: Rscript {0}
# - name: Compact PDF in macOS
# if: runner.os == 'macOS'
# run: |
# tools::compactPDF(paths = "./inst/doc", gs_quality = "ebook")
# rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check", build_args = '--compact-vignettes="both"')
- name: Check
env:
_R_CHECK_CRAN_INCOMING_REMOTE_: false
run: |
options(crayon.enabled = TRUE)
devtools::check(args = c('--as-cran'), build_args = c('--compact-vignettes=both'))
shell: Rscript {0}
- name: Upload check results
if: failure()
uses: actions/upload-artifact@main
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check