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v0.8.0

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@John-P John-P released this 01 Apr 20:57
· 1 commit to main since this release
5231983

✨ New

  • Add DICOM writer.
  • Avoid decoding entire TIFF before conversion starts.
  • TIFFReader can now expose a dask array view (using tiffile Zarr view
    underneath).
  • Add overwrite option to transcode CLI mode.
  • Refactor to use persistent worker subprocesses. This avoids recreating
    the reader object for each region read. For some reader such as
    DICOMWSIReader this significantly improves performance.
  • General refactoring and code cleanup.

🐛 Bug Fixes

  • Fix writing MPP for SVSWriter.
  • Remove OpenSlide thumbnail generation method. This would cause the
    process to run out of memory for some files and the base
    implementation works just as well without this memory issue.