opencb-ansible-docker

Install OpenCB with Docker via Ansible

The new code is under ./compose

docker-compose up -d

Doing the above should build up the environment, and run the tutuorial.

You can use create-server to make use of an openstack instance, ansible used to bring up docker and the above compose stack.

There is some work here on adding swarm into the ansilbe https://github.com/JohnGarbutt/data-acc/blob/2c004eaa5ade284d1a70c7d5ebb71427192d4aeb/ansible/master.yml#L24

TODO: more info

Old Stuff

To run this set of playbooks, please execute:

ansible-playbook master.yml

Install notes

You may find this useful to run the above ansible-playbook command:

virtualenv .venv
. .venv/bin/activate
pip install -U pip
pip install -U ansible docker
ansible-galaxy install -r requirements.yml

Note it also assumes the current running user can ssh into localhost.

Using OpenCGA

See the following URL for where opencga is installed:

http://localhost:8080/opencga-1.2.0

Monitoring

• Grafana: http://localhost:3000 (user: admin, password: admin)
• Prometheus: http://localhost:9090/consoles/node.html
• Prometheus node exporter: http://localhost:9100/metrics
• cAdvisor: http://localhost:9080